RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 AP5Z1O43299 807 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 FRS3O43559 492 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 PIP5K1CO60331 668 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ECE2O60344 883 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 TLR2O60603 784 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 C1QL1O75973 258 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ATP5BP06576 529 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 ATXN1LP0C7T5 689 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 ACADSP16219 412 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 STMN1P16949 149 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CTNNA2P26232 953 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 GNA11P29992 359 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 HSPA9P38646 679 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 ZNF75DP51815 510 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 NEK3P51956 506 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SUMO3P55854 103 aaPredicted RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 SRP54P61011 504 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 CSNK2BP67870 215 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 COG7P83436 770 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 PPP2R2BQ00005 443 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 STK4Q13043 487 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SLC13A2Q13183 592 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 PRKG2Q13237 762 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CCNG2Q16589 344 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 AARDQ4LEZ3 155 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 RNF220Q5VTB9 566 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 IL31Q6EBC2 164 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CCDC149Q6ZUS6 474 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SLC9B2Q86UD5 537 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 MICU3Q86XE3 530 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ZNF680Q8NEM1 530 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 OR6B3Q8NGW1 331 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 GOT1L1Q8NHS2 421 aaPredicted RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 TEX47Q8TBZ9 253 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 PHOSPHO2Q8TCD6 241 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SHC3Q92529 594 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SEPT8Q92599 483 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ZC3H10Q96K80 434 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 CEP170P1Q96L14 293 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 TSNARE1Q96NA8 513 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CENPKQ9BS16 269 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 HERPUD2Q9BSE4 406 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 PI4K2AQ9BTU6 479 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SPATA16Q9BXB7 569 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 TRIM15Q9C019 465 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 NDST4Q9H3R1 872 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 R3HDMLQ9H3Y0 253 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 LRRC19Q9H756 370 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ARHGEF38Q9NXL2 777 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 MRPL39Q9NYK5 338 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 GGA3Q9NZ52 723 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 HACD3Q9P035 362 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 ZNHIT2Q9UHR6 403 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 SH3BGRL2Q9UJC5 107 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 NDRG4Q9ULP0 352 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 TBC1D30Q9Y2I9 924 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 MRPS17Q9Y2R5 130 aaKnown RBP5.57□□□□□ -1.52
COPS3-209ENST00000486810 IFT52Q9Y366 437 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CACNG2Q9Y698 323 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 IFT140Q96RY7 1462 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 WDR7Q9Y4E6 1490 aa5.57□□□□□ -1.52
COPS3-209ENST00000486810 CPDO75976 1380 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 LOC100653049A0A140TA62 436 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 ACOD1A6NK06 481 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 ZAR1LA6NP61 321 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 L7N2F9 121 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 UBXN8O00124 270 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 APAF1O14727 1248 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 XPO1O14980 1071 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 RNMTO43148 476 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 PPIP5K2O43314 1243 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 GATCO43716 136 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 N4BP1O75113 896 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 KRT34O76011 436 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 SNAPINO95295 136 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 GNA14O95837 355 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 NUDT3O95989 172 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 CSF1RP07333 972 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 TMEM11P17152 192 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 RHCEP18577 417 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 NUDT1P36639 197 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 PPARGP37231 505 aaPredicted RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 GRIA3P42263 894 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 MTIF2P46199 727 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 GSSP48637 474 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 PXNP49023 591 aaPredicted RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 SULT1E1P49888 294 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 UBE2IP63279 158 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 OTUD4Q01804 1114 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 RHDQ02161 417 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 LRMPQ12912 555 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 CSTF3Q12996 717 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 NCF4Q15080 339 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 RGS21Q2M5E4 152 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 CNPY1Q3B7I2 92 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 FBXO48Q5FWF7 155 aa5.56□□□□□ -1.52
COPS3-209ENST00000486810 AARS2Q5JTZ9 985 aaKnown RBP5.56□□□□□ -1.52
COPS3-209ENST00000486810 TCTE1Q5JU00 501 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms