RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ADAT2Q7Z6V5 191 aaKnown RBP6.98□□□□□ -1.29
HDAC3-209ENST00000486618 STRA8Q7Z7C7 330 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 TADA2BQ86TJ2 420 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 FAM124AQ86V42 546 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 LURAP1LQ8IV03 231 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 GBP7Q8N8V2 638 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-209ENST00000486618 ACMSDQ8TDX5 336 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 DNAJC19Q96DA6 116 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 WDR89Q96FK6 387 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-209ENST00000486618 CHCHD6Q9BRQ6 235 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 NAA15Q9BXJ9 866 aaKnown RBP6.98□□□□□ -1.29
HDAC3-209ENST00000486618 DPEP3Q9H4B8 488 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 KBTBD4Q9NVX7 518 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 SPATA7Q9P0W8 599 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 GPN3Q9UHW5 284 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-209ENST00000486618 HPCAL4Q9UM19 191 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 SUFUQ9UMX1 484 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 NME7Q9Y5B8 376 aa6.98□□□□□ -1.29
HDAC3-209ENST00000486618 H0Y8X5 98 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ENC1O14682 589 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 GPR39O43194 453 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 SLC7A4O43246 635 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 GREM1O60565 184 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TSPAN3O60637 253 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 LDOC1O95751 146 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TBX18O95935 607 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CYBBP04839 570 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 EPHX1P07099 455 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 DLATP10515 647 aaKnown RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CD27P26842 260 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ACTN2P35609 894 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 NOP2P46087 812 aaKnown RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CASP5P51878 434 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 BCAT1P54687 386 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 SLC12A2P55011 1212 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 MFAP3P55082 362 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 C21orf59P57076 290 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CDC16Q13042 620 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ZNF234Q14588 700 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TERF2Q15554 542 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 C15orf59Q2T9L4 293 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 BOLA3Q53S33 107 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 MEI1Q5TIA1 1274 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TLDC1Q6P9B6 456 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 KLHDC10Q6PID8 442 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 SERPINA13PQ6UXR4 307 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ANKS1BQ7Z6G8 1248 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CBWD2Q8IUF1 395 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CBARPQ8N350 705 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 OR2T3Q8NH03 318 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 GOLGA5Q8TBA6 731 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 UTP15Q8TED0 518 aaKnown RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 FGF11Q92914 225 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 WBP1Q96G27 269 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CRB3Q9BUF7 120 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 SLC2A11Q9BYW1 496 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TRIM9Q9C026 710 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 DCLK3Q9C098 648 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 BTBD1Q9H0C5 482 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 LHX5Q9H2C1 402 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 CLSTN2Q9H4D0 955 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 TM9SF3Q9HD45 589 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 PANK4Q9NVE7 773 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ELOVL2Q9NXB9 296 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 PLK2Q9NYY3 685 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 HSPBP1Q9NZL4 362 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 GPR34Q9UPC5 381 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 KALRNO60229 2985 aa6.97□□□□□ -1.29
HDAC3-209ENST00000486618 ARID1BQ8NFD5 2236 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-209ENST00000486618 A0A1B0GTQ1 180 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 KCNK3O14649 394 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 YKT6O15498 198 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 TLX3O43711 291 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 BRINP1O60477 761 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ERLIN1O75477 346 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 FBXO21O94952 628 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 FSBPO95073 299 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 SEMA4FO95754 770 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 HSPA4LO95757 839 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 PENKP01210 267 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ITGAVP06756 1048 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 GSTP1P09211 210 aaKnown RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 RALAP11233 206 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 RARGP13631 454 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ABCB4P21439 1286 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ACSL1P33121 698 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 S100A5P33763 92 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 HNF4AP41235 474 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CTSKP43235 329 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 MYL6P60660 151 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 COG7P83436 770 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 RHDQ02161 417 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 GRIN1Q05586 938 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 BTKQ06187 659 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms