RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TM7SF2O76062 418 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 LDOC1O95751 146 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 CSF2P04141 144 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 KRT7P08729 469 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 HOXC4P09017 264 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 ATXN1LP0C7T5 689 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 CKMT2P17540 419 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CR2P20023 1033 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 AMPD1P23109 780 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 DGKAP23743 735 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CCNCP24863 283 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 GKP32189 559 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ABL2P42684 1182 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 HADHBP55084 474 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 CDH6P55285 790 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 AP1S1P61966 158 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 HNRNPKP61978 463 aaKnown RBP eCLIP7.07□□□□□ -1.28
VPS50-218ENST00000485994 ZNF211Q13398 564 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 PTK2BQ14289 1009 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 LBRQ14739 615 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 PAFAH1B3Q15102 231 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 SMAD1Q15797 465 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 PRAMEF14Q5SWL7 426 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ATXN7L2Q5T6C5 722 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 LRRC38Q5VT99 294 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 SEL1L3Q68CR1 1132 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 TMCO3Q6UWJ1 677 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 LAYNQ6UX15 382 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 Q6ZSR6 202 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 TMPRSS12Q86WS5 348 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ZNF354CQ86Y25 554 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CNGA4Q8IV77 575 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 RHOT2Q8IXI1 618 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 RAVER1Q8IY67 606 aaKnown RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 SLC25A45Q8N413 288 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 RYBPQ8N488 228 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 CHCHD4Q8N4Q1 142 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 TEX26Q8N6G2 289 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 NPWQ8N729 165 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 FAM181AQ8N9Y4 354 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 OR13H1Q8NG92 308 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ZNF564Q8TBZ8 553 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CTNNBL1Q8WYA6 563 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 FAF2Q96CS3 445 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CCDC42Q96M95 316 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 TSGA13Q96PP4 275 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 SPSB2Q99619 263 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 C1QTNF7Q9BXJ2 289 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ATP13A3Q9H7F0 1226 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 NHEJ1Q9H9Q4 299 aaPredicted RBP7.07□□□□□ -1.28
VPS50-218ENST00000485994 USP29Q9HBJ7 922 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ABHD10Q9NUJ1 306 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 ETNK2Q9NVF9 386 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 DKK4Q9UBT3 224 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 BTBD3Q9Y2F9 522 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 SPEGQ15772 3267 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 AKAP13Q12802 2813 aa7.07□□□□□ -1.28
VPS50-218ENST00000485994 MYLKQ15746 1914 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 AKR1B15C9JRZ8 316 aaPredicted RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 NEMP1O14524 444 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 ENC1O14682 589 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 RAD51BO15315 384 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 INSIG1O15503 277 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 HYAL3O43820 417 aaPredicted RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 AKR1B10O60218 316 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 MFAP3LO75121 409 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 PIAS2O75928 621 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 LCA5LO95447 670 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 TOP3BO95985 862 aaKnown RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 GIMD1P0DJR0 217 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 TCF4P15884 667 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 PRLRP16471 622 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 ACP1P24666 158 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 NFKBIAP25963 317 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 SERPINA4P29622 427 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 TRIM23P36406 574 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 SLC1A1P43005 524 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 E2F1Q01094 437 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 BCL2L1Q07817 233 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 SLC10A7Q0GE19 358 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 FZD2Q14332 565 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 MARC1Q5VT66 337 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 TXNRD3NBQ6F5E7 133 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 ALG1LQ6GMV1 187 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 ERAP2Q6P179 960 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 UNQ6494/PRO21346Q6UXR6 183 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 LEKR1Q6ZMV7 388 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 NLRP8Q86W28 1048 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 BBS5Q8N3I7 341 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 OR6K2Q8NGY2 324 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 OR4C6Q8NH72 309 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 PCDH19Q8TAB3 1148 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 SLC35G2Q8TBE7 412 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 CXorf40AQ8TE69 158 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms