RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ZFR2Q9UPR6 939 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 CHKBQ9Y259 395 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 EP300Q09472 2414 aaPredicted RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 ADAMTS9Q9P2N4 1935 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 FAM186AA6NE01 2351 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 PI4KAP42356 2102 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 RIF1Q5UIP0 2472 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 IGLON5A6NGN9 336 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 A8MX80 341 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 RIOK3O14730 519 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 KHNYNO15037 678 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 PGLSO95336 258 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 FGGP02679 453 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 MMP2P08253 660 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 PDHA1P08559 390 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 CTPS1P17812 591 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 TGM1P22735 817 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 MMP12P39900 470 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 CSNK1EP49674 416 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 SUOXP51687 545 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 EPHB1P54762 984 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 RPS21P63220 83 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 SKOR1P84550 965 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 IHHQ14623 411 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 PCSK7Q16549 785 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 ZNF284Q2VY69 593 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 AASDHQ4L235 1098 aaPredicted RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 NAPEPLDQ6IQ20 393 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 PRR23CQ6ZRP0 262 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 PID1Q7Z2X4 250 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 RABEPKQ7Z6M1 372 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 C17orf53Q8N3J3 647 aaPredicted RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 LPCAT1Q8NF37 534 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 SPATA22Q8NHS9 363 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 CEP76Q8TAP6 659 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 C1orf54Q8WWF1 131 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 IMP4Q96G21 291 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 TEKT5Q96M29 485 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 ORAI3Q9BRQ5 295 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 NUSAP1Q9BXS6 441 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 TDRD1Q9BXT4 1180 aaKnown RBP11.92□□□□□ -0.5
HPS4-214ENST00000485842 SLC25A51Q9H1U9 297 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 UBP1Q9NZI7 540 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 B4GALT6Q9UBX8 382 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 RSPH14Q9UHP6 348 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 CA5BQ9Y2D0 317 aa11.92□□□□□ -0.5
HPS4-214ENST00000485842 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 TP53BP1Q12888 1972 aaPredicted RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 A0A1B0GVT2 93 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 A0A1W2PQ67 120 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 PRR5-ARHGAP8B1AHC4 643 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 C10orf142B7Z368 130 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 WNT9AO14904 365 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 PMPCBO75439 489 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 MT-CYBP00156 380 aaPredicted RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 ELFN1P0C7U0 828 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 NFKBIAP25963 317 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 CD68P34810 354 aaPredicted RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 GNG11P61952 73 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 IRX4P78413 519 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 SGCGQ13326 291 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 TEAD4Q15561 434 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 LONRF2Q1L5Z9 754 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 TMEM52BQ4KMG9 183 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 ITPRIPL1Q6GPH6 555 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 SLC23A3Q6PIS1 610 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 USP45Q70EL2 814 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 KDELC2Q7Z4H8 507 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 CCDC110Q8TBZ0 833 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 VAT1Q99536 393 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 GTPBP2Q9BX10 602 aaKnown RBP11.91□□□□□ -0.5
HPS4-214ENST00000485842 SLC17A9Q9BYT1 436 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 PCDH9Q9HC56 1237 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 CAPN10Q9HC96 672 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 DNPEPQ9ULA0 475 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 SLC6A14Q9UN76 642 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 DMTF1Q9Y222 760 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
HPS4-214ENST00000485842 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 LNP1A1A4G5 178 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 NPIPB15A6NHN6 443 aaPredicted RBP11.9□□□□□ -0.5
HPS4-214ENST00000485842 GOLGA8CPA6NN73 597 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 PRAMEF26H0Y7S4 382 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 LIASO43766 372 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 LZTS3O60299 673 aaPredicted RBP11.9□□□□□ -0.5
HPS4-214ENST00000485842 FZD6O60353 706 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 TM7SF2O76062 418 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 PAK4O96013 591 aaPredicted RBP11.9□□□□□ -0.5
HPS4-214ENST00000485842 ALPIP09923 528 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 CYP2A6P11509 494 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms