RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 LDHAP00338 332 aaKnown RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 RALAP11233 206 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 CCDC130P13994 396 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 PRLRP16471 622 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 NR1D1P20393 614 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 ABCD1P33897 745 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 NUDT1P36639 197 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 METAP1P53582 386 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 MAPK10P53779 464 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 CLDN2P57739 230 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 HNRNPKP61978 463 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 MVKQ03426 396 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 KLRB1Q12918 225 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 SETMARQ53H47 684 aaPredicted RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 LACTB2Q53H82 288 aaPredicted RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 HYIQ5T013 277 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 KIAA0907Q7Z7F0 614 aaPredicted RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TADA2BQ86TJ2 420 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 ACOT1Q86TX2 421 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TRIM69Q86WT6 500 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 SLC22A18ASQ8N1D0 253 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 STK40Q8N2I9 435 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 FAM169BQ8N8A8 192 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 C19orf47Q8N9M1 422 aaKnown RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TEX19Q8NA77 164 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TMEM145Q8NBT3 493 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF548Q8NEK5 533 aaPredicted RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 WDR48Q8TAF3 677 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 WFDC5Q8TCV5 224 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 SLC2A14Q8TDB8 520 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 USP7Q93009 1102 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TMA16Q96EY4 203 aaKnown RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 PPP1R13BQ96KQ4 1090 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 CBWD1Q9BRT8 395 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 ACBD3Q9H3P7 528 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 DONSONQ9NYP3 566 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 DKK3Q9UBP4 350 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 LOXL2Q9Y4K0 774 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 RP1P56715 2156 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 OTOGQ6ZRI0 2925 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CRYBG3Q68DQ2 2970 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 DOCK9Q9BZ29 2069 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1W2PQ27 194 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1W2PQ64 194 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1W2PQC6 194 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TARSL2A2RTX5 802 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 NTN3O00634 580 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 PLRG1O43660 514 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 DIAPH2O60879 1101 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CLSTN1O94985 981 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CD3EP07766 207 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 FAM163BP0C2L3 166 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 PRF1P14222 555 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 ADORA2BP29275 332 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 DRD3P35462 400 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 ETV5P41161 510 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CSKP41240 450 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 SGSHP51688 502 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 LAPTM5Q13571 262 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 EIF2S3LQ2VIR3 472 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 OR6B2Q6IFH4 312 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 Q6ZSR6 202 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF720Q7Z2F6 126 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TRAPPC11Q7Z392 1133 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TMPRSS9Q7Z410 1059 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 SCD5Q86SK9 330 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 SFR1Q86XK3 245 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 FAM217AQ8IXS0 508 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 SLC35F3Q8IY50 421 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 ADCY4Q8NFM4 1077 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 OR6P1Q8NGX9 317 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 LMX1AQ8TE12 382 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 PDCD6IPQ8WUM4 868 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 NAT6Q93015 286 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TNIP3Q96KP6 325 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 MRGPRX3Q96LB0 322 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CATSPER2Q96P56 530 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 GFM1Q96RP9 751 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 IL12RB2Q99665 862 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CGRRF1Q99675 332 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 ST6GALNAC4Q9H4F1 302 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 SMYD3Q9H7B4 428 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 CSNK1G1Q9HCP0 422 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 FAM49BQ9NUQ9 324 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 MARCH2Q9P0N8 246 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TBC1D7Q9P0N9 293 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 NOL7Q9UMY1 257 aaKnown RBP5.48□□□□□ -1.53
PTPN4-210ENST00000485247 EXOC7Q9UPT5 735 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 TP53TG5Q9Y2B4 290 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 DAAM1Q9Y4D1 1078 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 KCTD3Q9Y597 815 aa5.48□□□□□ -1.53
PTPN4-210ENST00000485247 FBN3Q75N90 2809 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 EDDM13A0A1B0GTR0 161 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 EFCAB7A8K855 629 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms