RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PRPH2P23942 346 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 MC5RP33032 325 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ADRA1BP35368 520 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CLK3P49761 638 aaKnown RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 BLKP51451 505 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CHN2P52757 468 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 RABGGTBP53611 331 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 OAZ1P54368 228 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 YPEL5P62699 121 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 TFAP4Q01664 338 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CYP4A11Q02928 519 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 NPRL3Q12980 569 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF273Q14593 569 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 IL11RAQ14626 422 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 IL13RA2Q14627 380 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 HLXQ14774 488 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 PPP2R5BQ15173 497 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ALG11Q2TAA5 492 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 AP5B1Q2VPB7 878 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 PCGF3Q3KNV8 242 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 KBTBD12Q3ZCT8 623 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 PREPLQ4J6C6 727 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 RBM20Q5T481 1227 aaKnown RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 NAPEPLDQ6IQ20 393 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 GRHL2Q6ISB3 625 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 FOXR2Q6PJQ5 311 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 SERPINA13PQ6UXR4 307 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 TMPRSS9Q7Z410 1059 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 SPATA19Q7Z5L4 167 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 IQCHQ86VS3 1027 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF276Q8N554 614 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ADPRHL1Q8NDY3 354 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 DENND6BQ8NEG7 585 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 HASPINQ8TF76 798 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CORO2AQ92828 525 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ZKSCAN4Q969J2 545 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 LRRC59Q96AG4 307 aaKnown RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 LENG9Q96B70 501 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 PRR11Q96HE9 360 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 HS6ST2Q96MM7 605 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CAMK1GQ96NX5 476 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 OSBPL9Q96SU4 736 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 MNTQ99583 582 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 CPPED1Q9BRF8 314 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 HEMGNQ9BXL5 484 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 WDR11Q9BZH6 1224 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 FAM129AQ9BZQ8 928 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ABCG8Q9H221 673 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 PLK3Q9H4B4 646 aa4.58□□□□□ -1.68
PTCD3-214ENST00000483925 EXO1Q9UQ84 846 aaKnown RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-214ENST00000483925 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 SYCE3A1L190 88 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 OOEPA6NGQ2 149 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ANXA2P2A6NMY6 339 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 SLC33A1O00400 549 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ZC3H11AO75152 810 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 STC2O76061 302 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 IPO13O94829 963 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 KAT7O95251 611 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ACTN1P12814 892 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 PKMP14618 531 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 HOXB9P17482 250 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 IGFBP2P18065 325 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GNAT2P19087 354 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ADRA1DP25100 572 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 PTPN3P26045 913 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GSTM2P28161 218 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF81P51508 661 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 LUMP51884 338 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GALCP54803 685 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 SLC26A5P58743 744 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 RALGDSQ12967 914 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 DNASE1L3Q13609 305 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 INAQ16352 499 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 LY6KQ17RY6 165 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 FAM214AQ32MH5 1076 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 MYLK3Q32MK0 819 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 EDRF1Q3B7T1 1238 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 SFMBT2Q5VUG0 894 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ETFRF1Q6IPR1 90 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 AADACL2Q6P093 401 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 IL20RBQ6UXL0 311 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GBP6Q6ZN66 633 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 HTR3DQ70Z44 454 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 FAM160B2Q86V87 743 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ELOA2Q8IYF1 753 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 MMP21Q8N119 569 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GHDCQ8N2G8 530 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 MAFAQ8NHW3 353 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ATG4AQ8WYN0 398 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ARHGEF26Q96DR7 871 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ARSGQ96EG1 525 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF512Q96ME7 567 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 OR2A14Q96R47 310 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 IFIH1Q9BYX4 1025 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 NT5C3AQ9H0P0 336 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 PDZD7Q9H5P4 517 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms