RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ALOX15BO15296 676 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PLRG1O43660 514 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 TLX3O43711 291 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 LEFTY1O75610 366 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 TRUB2O95900 331 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ALPPL2P10696 532 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PDGFRAP16234 1089 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF18P17022 549 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CDK11BP21127 795 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 GLDCP23378 1020 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ACP1P24666 158 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ITPKBP27987 946 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 MAT2AP31153 395 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CCR1P32246 355 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 DRD3P35462 400 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 GPD2P43304 727 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 RPL34P49207 117 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 STK19P49842 368 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CLDN6P56747 220 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PPP2CBP62714 309 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 YWHAZP63104 245 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 SUMO1P63165 101 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PPP2CAP67775 309 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CDK17Q00537 523 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 MEA1Q16626 185 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 SETMARQ53H47 684 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 SFMBT2Q5VUG0 894 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 SYPL2Q5VXT5 272 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 RRAGAQ7L523 313 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 GPR155Q7Z3F1 870 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 TRIM69Q86WT6 500 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CCAR2Q8N163 923 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ADCY4Q8NFM4 1077 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 RFFLQ8WZ73 363 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ERCC4Q92889 916 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 KAT5Q92993 513 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 MFSD3Q96ES6 412 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 DHTKD1Q96HY7 919 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 CCDC114Q96M63 670 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 Q96M66 194 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 RPRD1AQ96P16 312 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 FCRL3Q96P31 734 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ZSWIM1Q9BR11 485 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 THAP9Q9H5L6 903 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PRORYQ9H606 182 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 FAM204AQ9H8W3 233 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PREBQ9HCU5 417 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 DYRK4Q9NR20 520 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 ARHGAP20Q9P2F6 1191 aa6.02□□□□□ -1.45
CSDE1-207ENST00000483407 XPO7Q9UIA9 1087 aaKnown RBP6.02□□□□□ -1.45
CSDE1-207ENST00000483407 PLXNB3Q9ULL4 1909 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 CABIN1Q9Y6J0 2220 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 BICDL2A1A5D9 508 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 E5RJQ4 531 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 MCF2LO15068 1137 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 PRODHO43272 600 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 THAP12O43422 761 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 BRINP1O60477 761 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 SDC3O75056 442 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 RTN2O75298 545 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 LETM1O95202 739 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 GNA14O95837 355 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 MT-CO3P00414 261 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 CALCAP01258 141 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 IGLV3-25P01717 112 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 PRB1P04280 392 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 GLI1P08151 1106 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 FAM87AP0C7U9 286 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 VAV1P15498 845 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 AKT2P31751 481 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 PLK1P53350 603 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF177Q13360 481 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 DLG2Q15700 870 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 SFRP5Q5T4F7 317 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 AGBL4Q5VU57 503 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 BROXQ5VW32 411 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 KLHL10Q6JEL2 608 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 CXorf57Q6NSI4 855 aaKnown RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 FBXL22Q6P050 247 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 NEK5Q6P3R8 708 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 DENND1BQ6P3S1 775 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 OGFOD3Q6PK18 319 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 C22orf34Q6ZV56 151 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 KANSL1Q7Z3B3 1105 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 TMEM110Q86TL2 294 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 SPATS2Q86XZ4 545 aaKnown RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 ARHGEF19Q8IW93 802 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 LSMEM2Q8N112 164 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 DCBLD1Q8N8Z6 715 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 OR4C6Q8NH72 309 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 LMO3Q8TAP4 145 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 SPATA20Q8TB22 786 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 FRS2Q8WU20 508 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 FAM131CQ96AQ9 280 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 FAM81BQ96LP2 452 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 CCDC140Q96MF4 163 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 CLUHP3Q96NS8 147 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms