RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 RBM44Q6ZP01 1051 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 SRLQ86TD4 932 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 ARFGAP1Q8N6T3 406 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 PAF1Q8N7H5 531 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 TSEN2Q8NCE0 465 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 NAT6Q93015 286 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 SYT11Q9BT88 431 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 APOOQ9BUR5 198 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 SYNDIG1Q9H7V2 258 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 OR1A2Q9Y585 309 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 ENTPD2Q9Y5L3 495 aa16.71■□□□□ 0.27
RAB11FIP3-209ENST00000483002 A0A1W2PNU3 283 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TSPAN11A1L157 253 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ATXN7O15265 892 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RNF8O76064 485 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 HTR1BP28222 390 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RBMS1P29558 406 aaKnown RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RGRP47804 291 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ELOCQ15369 112 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ALG11Q2TAA5 492 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PPP6R3Q5H9R7 873 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 BROXQ5VW32 411 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PLEKHA7Q6IQ23 1121 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PPP1R2P3Q6NXS1 205 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 BRAT1Q6PJG6 821 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ZSWIM9Q86XI8 627 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 FSTL5Q8N475 847 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KCNE4Q8WWG9 221 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GRAMD1AQ96CP6 724 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TUBGCP5Q96RT8 1024 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PEBP4Q96S96 227 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CCDC3Q9BQI4 270 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SNRNP25Q9BV90 132 aaKnown RBP16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 EDEM3Q9BZQ6 932 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ASCL3Q9NQ33 180 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 THSD1Q9NS62 852 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SIRPGQ9P1W8 387 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ATP8A1Q9Y2Q0 1164 aa16.7■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TEX51A0A1B0GUA7 166 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TMEM191CA6NGB0 347 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 DFFAO00273 331 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KLK10O43240 276 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TCEA3O75764 348 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RASGRP1O95267 797 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 FTLP02792 175 aaPredicted RBP16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PCCBP05166 539 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ALPIP09923 528 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ERCC2P18074 760 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SERPINA4P29622 427 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CSNK1DP48730 415 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SRP54P61011 504 aaKnown RBP16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TYRO3Q06418 890 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 C19orf57Q0VDD7 668 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NFATC4Q14934 902 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CCDC183Q5T5S1 534 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RFX8Q6ZV50 586 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PCDH19Q8TAB3 1148 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SLC46A1Q96NT5 459 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TRIM7Q9C029 511 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 HAUS4Q9H6D7 363 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ATP13A3Q9H7F0 1226 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SP110Q9HB58 689 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CPNE5Q9HCH3 593 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KLQ9UEF7 1012 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MYO6Q9UM54 1294 aa16.69■□□□□ 0.26
RAB11FIP3-209ENST00000483002 UNC13CQ8NB66 2214 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 EIF3CLB5ME19 914 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TK2O00142 265 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PRPSAP2O60256 369 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MIPP30301 263 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MMP12P39900 470 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 BCL2L1Q07817 233 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SPIDRQ14159 915 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ASIC2Q16515 512 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 LVRNQ6Q4G3 990 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ARHGAP36Q6ZRI8 547 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ARL10Q8N8L6 244 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PLA2G15Q8NCC3 412 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 WDR48Q8TAF3 677 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 EIF3CQ99613 913 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CINPQ9BW66 212 aaPredicted RBP16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NAT10Q9H0A0 1025 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GPR34Q9UPC5 381 aa16.68■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PMS2P1A4D2B8 440 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 A8MX80 341 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RECQL5O94762 991 aaPredicted RBP16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TNFP01375 233 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SCNN1BP51168 640 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TMPRSS3P57727 454 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MTM1Q13496 603 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 AGERQ15109 404 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ANO6Q4KMQ2 910 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ARHGAP40Q5TG30 622 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms