RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SREBF2Q12772 1141 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 NAB1Q13506 487 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 KCNJ11Q14654 390 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TMED2Q15363 201 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 SF1Q15637 639 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 TPSAB1Q15661 275 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 FSCN1Q16658 493 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 SLC25A52Q3SY17 297 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MFSD14CQ5VZR4 134 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 SCYL2Q6P3W7 929 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 ZNF449Q6P9G9 518 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 C17orf99Q6UX52 265 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 C3orf62Q6ZUJ4 267 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 NEK10Q6ZWH5 1172 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 SRRM1Q8IYB3 904 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 LRRC34Q8IZ02 419 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 ADGRF2Q8IZF7 708 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 VPS52Q8N1B4 723 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 EFHBQ8N7U6 833 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 FAM71DQ8N9W8 422 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 ZNF398Q8TD17 642 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 DNAJB3Q8WWF6 145 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MTBPQ96DY7 904 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MVB12AQ96EY5 273 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 VMP1Q96GC9 406 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TGS1Q96RS0 853 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 PTPN18Q99952 460 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 NAT9Q9BTE0 207 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TMEM120AQ9BXJ8 343 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 EIF2AQ9BY44 585 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 GP6Q9HCN6 339 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 WASH6PQ9NQA3 447 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 ITM2CQ9NQX7 267 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 STARD7Q9NQZ5 370 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 CCM2LQ9NUG4 571 aaPredicted RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 NSMCE4AQ9NXX6 385 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TUBGCP4Q9UGJ1 667 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 DSEQ9UL01 958 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 GINS2Q9Y248 185 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 ZNF451Q9Y4E5 1061 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TRPV2Q9Y5S1 764 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MGAMO43451 1857 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 PDCD11Q14690 1871 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 TCP11X1B4DZS4 312 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 POC1B-GALNT4F8VUJ3 575 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 IRAK2O43187 625 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 HNRNPCL1O60812 293 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 KRT37O76014 449 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 UBXN7O94888 489 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 OAS1P00973 400 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 INHBAP08476 426 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 ZSCAN5DPP0CG00 497 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 RAC2P15153 192 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 PCSK1P29120 753 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 HCAR3P49019 387 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SERPINB9P50453 376 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 ATXN1P54253 815 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 HDAC4P56524 1084 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 HUNKP57058 714 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 LILRA4P59901 499 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 YWHAZP63104 245 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 BASP1P80723 227 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 MRPS6P82932 125 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 ZNF200P98182 395 aaPredicted RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 DNAJC3Q13217 504 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 PDK1Q15118 436 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 PDK4Q16654 411 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 ARL13BQ3SXY8 428 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 HSF5Q4G112 596 aaPredicted RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 TMEM177Q53S58 311 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 FAM209BQ5JX69 171 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 MFSD4BQ5TF39 518 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 HHATQ5VTY9 493 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 NUGGCQ68CJ6 796 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 GTF2IRD2BQ6EKJ0 949 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TWF2Q6IBS0 349 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 CYP4V2Q6ZWL3 525 aaPredicted RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 BEND5Q7L4P6 421 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TRPM8Q7Z2W7 1104 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SPATA21Q7Z572 469 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 GTF2IRD2Q86UP8 949 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 UNC45BQ8IWX7 931 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SIX6OS1Q8N1H7 587 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SCML4Q8N228 414 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 ESX1Q8N693 406 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 C12orf29Q8N999 325 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 ZNF527Q8NB42 609 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TMEM145Q8NBT3 493 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 B3GALNT2Q8NCR0 500 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 FBXO36Q8NEA4 188 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 ADCY4Q8NFM4 1077 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 LRRC8CQ8TDW0 803 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 DENND1AQ8TEH3 1009 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 KBTBD7Q8WVZ9 684 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 LRTOMTQ8WZ04 291 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms