RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PTGR2Q8N8N7 351 aaPredicted RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 NCLNQ969V3 563 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 OSBPL6Q9BZF3 934 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 GBA3Q9H227 469 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 BDNFP23560 247 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 GLUD2P49448 558 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 SQLEQ14534 574 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PTPRCAPQ14761 206 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 TRIM16LQ309B1 348 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PKN3Q6P5Z2 889 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 CCDC81Q6ZN84 652 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 LINC00523Q86TU6 105 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 OR2T3Q8NH03 318 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 MRPL57Q9BQC6 102 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 COLEC11Q9BWP8 271 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PCDHGA7Q9Y5G6 932 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 GSTA4O15217 222 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 CYP2B6P20813 491 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 ATP6V1B2P21281 511 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 EIF2B2P49770 351 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 SULT2A1Q06520 285 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 NR1D2Q14995 579 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 RABL3Q5HYI8 236 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 DUS1LQ6P1R4 473 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 STYXQ8WUJ0 223 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 ISOC1Q96CN7 298 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 GPR22Q99680 433 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 SMOXQ9NWM0 555 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 SIPA1L1O43166 1804 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 PRSS51A0A1B0GVH4 220 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 UGT1A1P22309 533 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 UGT1A4P22310 534 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 GABRB3P28472 473 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 UGT1A3P35503 534 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 UGT1A5P35504 534 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 ARPP19P56211 112 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 RBBP7Q16576 425 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 TIGD2Q4W5G0 525 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 LSMEM2Q8N112 164 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 OR6J1Q8NGC5 347 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 GABPB2Q8TAK5 448 aaPredicted RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 HDAC10Q969S8 669 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 KCTD14Q9BQ13 255 aaPredicted RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 NSMCE4AQ9NXX6 385 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 ANKRD6Q9Y2G4 727 aa12.77□□□□□ -0.36
VPS52-218ENST00000482399 MTF2Q9Y483 593 aaPredicted RBP12.77□□□□□ -0.36
VPS52-218ENST00000482399 ANXA9O76027 345 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 BCL10O95999 233 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 CD4P01730 458 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 ALDH4A1P30038 563 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 KCNK10P57789 538 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SV2CQ496J9 727 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SGO1Q5FBB7 561 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 KCTD8Q6ZWB6 473 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 ERO1BQ86YB8 467 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 MIER2Q8N344 545 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TMEM102Q8N9M5 508 aaPredicted RBP12.77□□□□□ -0.37
VPS52-218ENST00000482399 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TEKT5Q96M29 485 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 DUSP16Q9BY84 665 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 EIF2B3Q9NR50 452 aaKnown RBP12.77□□□□□ -0.37
VPS52-218ENST00000482399 RGS18Q9NS28 235 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SH3GLB1Q9Y371 365 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 A8MT66 165 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 H3BNH8 94 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 MTSS1O43312 755 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TOMM70O94826 608 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SLC7A1P30825 629 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
VPS52-218ENST00000482399 SLC26A2P50443 739 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 CDK9P50750 372 aaKnown RBP12.77□□□□□ -0.37
VPS52-218ENST00000482399 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 GALNT18Q6P9A2 607 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 OSTM1Q86WC4 334 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 GFM2Q969S9 779 aaKnown RBP12.77□□□□□ -0.37
VPS52-218ENST00000482399 NRBF2Q96F24 287 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 TNFRSF12AQ9NP84 129 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms