RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 SFTPA2Q8IWL1 248 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 EXD3Q8N9H8 876 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 CENPIQ92674 756 aaPredicted RBP12.11□□□□□ -0.47
GCA-208ENST00000479199 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 TRIM4Q9C037 500 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 STRADBQ9C0K7 418 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 RETREG1Q9H6L5 497 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 PCDH12Q9NPG4 1184 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
GCA-208ENST00000479199 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 PISDQ9UG56 409 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 MFHAS1Q9Y4C4 1052 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 PCDHGA7Q9Y5G6 932 aa12.11□□□□□ -0.47
GCA-208ENST00000479199 TSPAN11A1L157 253 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 RASA4BC9J798 803 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 EPHB6O15197 1021 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 CCP110O43303 1012 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 RASA4O43374 803 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 NOBOXO60393 691 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 ITIH1P19827 911 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 GPD1P21695 349 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 RFC1P35251 1148 aaPredicted RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 MMP12P39900 470 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 PEX5P50542 639 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 SRP54P61011 504 aaKnown RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 SERINC3Q13530 473 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 INPP5AQ14642 412 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 LINC00303Q3SY05 128 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 INO80DQ53TQ3 878 aaPredicted RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 LVRNQ6Q4G3 990 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 ZNF677Q86XU0 584 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 CCNJLQ8IV13 435 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 Q8N9G6 341 aaPredicted RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 PLA2G15Q8NCC3 412 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
GCA-208ENST00000479199 CASKIN2Q8WXE0 1202 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 WDR92Q96MX6 357 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 PCDHB18PQ96TA0 734 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 APOOQ9BUR5 198 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 LRRN3Q9H3W5 708 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 LOXL2Q9Y4K0 774 aa12.1□□□□□ -0.47
GCA-208ENST00000479199 PRAMEF33A0A0G2JMD5 474 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 TMEM110-MUSTN1A8MSY1 372 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 CREB3O43889 395 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 PRAMEF10O60809 474 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 JMJD7P0C870 316 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 KRT3P12035 628 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 HTR1BP28222 390 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 CCKBRP32239 447 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 SOX5P35711 763 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 ETV5P41161 510 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 LIG3P49916 1009 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
GCA-208ENST00000479199 JAM2P57087 298 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
GCA-208ENST00000479199 NFKB2Q00653 900 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 CYTH1Q15438 398 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 UGP2Q16851 508 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 SLFN11Q7Z7L1 901 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 VASH2Q86V25 355 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 EXTL1Q92935 676 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 TMEM74Q96NL1 305 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 RBM15Q96T37 977 aaKnown RBP eCLIP12.09□□□□□ -0.47
GCA-208ENST00000479199 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 PDFQ9HBH1 243 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 FGF22Q9HCT0 170 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 MRPL40Q9NQ50 206 aaKnown RBP12.09□□□□□ -0.47
GCA-208ENST00000479199 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
GCA-208ENST00000479199 FOXJ2Q9P0K8 574 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 UBA2Q9UBT2 640 aaPredicted RBP12.09□□□□□ -0.47
GCA-208ENST00000479199 ACSL6Q9UKU0 697 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
GCA-208ENST00000479199 BSNQ9UPA5 3926 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 TMEM202A6NGA9 273 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 B4DGG1 531 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 TMX2-CTNND1H3BSU7 103 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
GCA-208ENST00000479199 WISP1O95388 367 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 LIPCP11150 499 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
GCA-208ENST00000479199 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
GCA-208ENST00000479199 NSFP46459 744 aaKnown RBP12.08□□□□□ -0.48
GCA-208ENST00000479199 RGRP47804 291 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 SUOXP51687 545 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 YBEYP58557 167 aaPredicted RBP12.08□□□□□ -0.48
GCA-208ENST00000479199 KCNC4Q03721 635 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 RALGDSQ12967 914 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 MTM1Q13496 603 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 PARP15Q460N3 678 aa12.08□□□□□ -0.48
GCA-208ENST00000479199 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms