RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CLEC18AA5D8T8 446 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CCL4P13236 92 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 RHOQP17081 205 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CLCN1P35523 988 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 FLT3P36888 993 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 SCNN1AP37088 669 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CCR10P46092 362 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 GABRB2P47870 512 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 MAPKAPK2P49137 400 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 SUOXP51687 545 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 NCAPHQ15003 741 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 MAP9Q49MG5 647 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 C4orf17Q53FE4 359 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CLEC18BQ6UXF7 455 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 GBP6Q6ZN66 633 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 SLC47A2Q86VL8 602 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CREBRFQ8IUR6 639 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 IL22RA1Q8N6P7 574 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CLEC18CQ8NCF0 446 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 TMEM35BQ8NCS4 154 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 CFAP57Q96MR6 1250 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 TAAR9Q96RI9 348 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 DPEP2Q9H4A9 486 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 ANAPC2Q9UJX6 822 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 MFHAS1Q9Y4C4 1052 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 SDK2Q58EX2 2172 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 B4DGG1 531 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 B4GAT1O43505 415 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 BUB1O43683 1085 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 KDELR3O43731 214 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 NUDT21O43809 227 aaKnown RBP17.31■□□□□ 0.36
VIM-204ENST00000478746 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
VIM-204ENST00000478746 CPNE6O95741 557 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 IGSF6O95976 241 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 B4GALNT1Q00973 533 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 HLTFQ14527 1009 aaKnown RBP eCLIP17.31■□□□□ 0.36
VIM-204ENST00000478746 KCTD16Q68DU8 428 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 NLRP14Q86W24 1093 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 SFTPA2Q8IWL1 248 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 PDXPQ96GD0 296 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 RDH14Q9HBH5 336 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 TMEM248Q9NWD8 314 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 LRP4O75096 1905 aa17.31■□□□□ 0.36
VIM-204ENST00000478746 SPTAN1Q13813 2472 aaKnown RBP17.3■□□□□ 0.36
VIM-204ENST00000478746 UTP20O75691 2785 aaKnown RBP17.3■□□□□ 0.36
VIM-204ENST00000478746 ZSCAN5CA6NGD5 496 aaPredicted RBP17.3■□□□□ 0.36
VIM-204ENST00000478746 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 FOXN3O00409 490 aaPredicted RBP17.3■□□□□ 0.36
VIM-204ENST00000478746 RAMP2O60895 175 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 TMCC1O94876 653 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 PCCBP05166 539 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 BMP6P22004 513 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 BPIFB4P59827 614 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 MTM1Q13496 603 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 AMZ1Q400G9 498 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 EFHC2Q5JST6 749 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 SPECC1LQ69YQ0 1117 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 SMYD5Q6GMV2 418 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 ZNF354CQ86Y25 554 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 FAM26EQ8N5C1 309 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 NETO2Q8NC67 525 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 OR56A4Q8NGH8 313 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 GPBAR1Q8TDU6 330 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 OR1E3Q8WZA6 343 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 PSMG3-AS1Q96PY0 264 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 CDH19Q9H159 772 aa17.3■□□□□ 0.36
VIM-204ENST00000478746 ARHGEF17Q96PE2 2063 aaPredicted RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 FAM170AA1A519 330 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 HGSO14964 777 aaPredicted RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 LIFP15018 202 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 PON1P27169 355 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 ALDH4A1P30038 563 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 ADRA1BP35368 520 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 LIG3P49916 1009 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 OR1D5P58170 312 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 RHOAP61586 193 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 ATP11AP98196 1134 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 NRG1Q02297 640 aaPredicted RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 PAK1Q13153 545 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 AGERQ15109 404 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 UGP2Q16851 508 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 MANEALQ5VSG8 457 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 RCBTB1Q8NDN9 531 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 HCAR2Q8TDS4 363 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 CATSPER2Q96P56 530 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 NCAPGQ9BPX3 1015 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 TMEM168Q9H0V1 697 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 PCDH12Q9NPG4 1184 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 MRPL40Q9NQ50 206 aaKnown RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 ZNF71Q9NQZ8 489 aaPredicted RBP17.29■□□□□ 0.36
VIM-204ENST00000478746 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
VIM-204ENST00000478746 DNAJC12Q9UKB3 198 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms