RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SOCS5O75159 536 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SERPINF2P08697 491 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ENGP17813 658 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PTPN3P26045 913 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 MMP12P39900 470 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ATXN3P54252 364 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 EPHB1P54762 984 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 EIF3EP60228 445 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 RPS21P63220 83 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 NIPAL4Q0D2K0 466 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ELP6Q0PNE2 266 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 GRIK2Q13002 908 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 NOMO1Q15155 1222 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 UGP2Q16851 508 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF284Q2VY69 593 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SLC45A4Q5BKX6 768 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 KIAA1161Q6NSJ0 714 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SLC23A3Q6PIS1 610 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 KDELC2Q7Z4H8 507 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 OR2I1PQ8NGU4 316 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 FATE1Q969F0 183 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 FEM1CQ96JP0 617 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 RBM15Q96T37 977 aaKnown RBP eCLIP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 IL12RB2Q99665 862 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ORAI3Q9BRQ5 295 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 BRD8Q9H0E9 1235 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 AMACRQ9UHK6 382 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ATP8A1Q9Y2Q0 1164 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 COQ6Q9Y2Z9 468 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 RAI2Q9Y5P3 530 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CACNA1AO00555 2505 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 A0A1B0GVT2 93 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 USP27XA6NNY8 438 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 HACD1B0YJ81 288 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 H0Y8X5 98 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 RIOK3O14730 519 aaKnown RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 WNT9AO14904 365 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 AREL1O15033 823 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 TSPAN6O43657 245 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 MMP20O60882 483 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ELFN1P0C7U0 828 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CTPS1P17812 591 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CA4P22748 312 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 RBL1P28749 1068 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CXCR5P32302 372 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 C21orf59P57076 290 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 POLR2LP62875 67 aaKnown RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 LMNB2Q03252 620 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 SGCGQ13326 291 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 FGL2Q14314 439 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 TEAD4Q15561 434 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 PCSK7Q16549 785 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 TMEM259Q4ZIN3 620 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF569Q5MCW4 686 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ARMC12Q5T9G4 340 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 DENND2CQ68D51 928 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ALG1LQ6GMV1 187 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 NAPEPLDQ6IQ20 393 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 NEK5Q6P3R8 708 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 DARS2Q6PI48 645 aaKnown RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 PTAR1Q7Z6K3 402 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CDKL3Q8IVW4 592 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 LPCAT1Q8NF37 534 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ARRDC2Q8TBH0 407 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 HTR3CQ8WXA8 447 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ATG4AQ8WYN0 398 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 ECHDC3Q96DC8 303 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 SLC17A9Q9BYT1 436 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 UBP1Q9NZI7 540 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 SLC6A14Q9UN76 642 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 CHKBQ9Y259 395 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 R3HDM2Q9Y2K5 976 aaKnown RBP6.94□□□□□ -1.3
BRCA1-215ENST00000478531 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
BRCA1-215ENST00000478531 A0A0U1RQS6 177 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 ARHGAP33O14559 1287 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 KCNN4O15554 427 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 MTSS1O43312 755 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PGLSO95336 258 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PAK4O96013 591 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 MT-CYBP00156 380 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-215ENST00000478531 SYPP08247 313 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 MMP2P08253 660 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 PDHA1P08559 390 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 ALPIP09923 528 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 RBP3P10745 1247 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 C6P13671 934 aa6.93□□□□□ -1.3
BRCA1-215ENST00000478531 NFKB1P19838 968 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms