RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 RGL4Q8IZJ4 473 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 ZNF398Q8TD17 642 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 NKX2-4Q9H2Z4 354 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TCAF1Q9Y4C2 921 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 J3KR12 359 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 GNGT2O14610 69 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 ADH5P11766 374 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 ZNF33AQ06730 810 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 SLC8B1Q6J4K2 584 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 MSANTD2Q6P1R3 559 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 FAM126AQ9BYI3 521 aaPredicted RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 SFXN1Q9H9B4 322 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3DA0A087WVF3 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3IA0A087WXS9 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3EA0A087X179 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3KA0A087X1G2 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3FA6NER0 549 aaPredicted RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3LB9A6J9 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 PRMT5O14744 637 aaPredicted RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 KPNA5O15131 536 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 HLA-DQB2P05538 268 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3HP0C7X1 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 SKIV2L2P42285 1042 aaKnown RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 HALP42357 657 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 RAB10P61026 200 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 USP46P62068 366 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 PLCL1Q15111 1095 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3GQ6DHY5 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3CQ6IPX1 549 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 BEND5Q7L4P6 421 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 GPSM1Q86YR5 675 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 UBR7Q8N806 425 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 ZMIZ2Q8NF64 920 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 ELMO1Q92556 727 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 NCLNQ969V3 563 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 TMEM248Q9NWD8 314 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 NMRK1Q9NWW6 199 aa12.09□□□□□ -0.47
PCCB-214ENST00000478469 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.09□□□□□ -0.47
PCCB-214ENST00000478469 MEFVO15553 781 aaPredicted RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 USP1O94782 785 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 PRKAA1Q13131 559 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 SLC13A4Q9UKG4 626 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 KRT34O76011 436 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 TYRP14679 529 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CHRNA4P43681 627 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CRY1Q16526 586 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 ALFQ53S48 1182 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 ZDHHC20Q5W0Z9 365 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 DET1Q7L5Y6 550 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 TAS1R1Q7RTX1 841 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 BRSK1Q8TDC3 778 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CMTM5Q96DZ9 223 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 ECT2Q9H8V3 914 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 FAM72CH0Y354 149 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 RPN2P04844 631 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 RPA3P35244 121 aaPredicted RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 MTHFRP42898 656 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CAPRIN1Q14444 709 aaKnown RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 TTMPQ5BVD1 217 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 FAM72AQ5TYM5 149 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 FAM72DQ6L9T8 149 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 CERS6Q6ZMG9 384 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 FAM72BQ86X60 149 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 PCYOX1LQ8NBM8 494 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 TIFAQ96CG3 184 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 KLHL32Q96NJ5 620 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 MRPL1Q9BYD6 325 aaKnown RBP12.08□□□□□ -0.48
PCCB-214ENST00000478469 ALG9Q9H6U8 611 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 ARL15Q9NXU5 204 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
PCCB-214ENST00000478469 GLYATL1P3A0A0U1RQE8 302 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.07□□□□□ -0.48
PCCB-214ENST00000478469 NDUFS2O75306 463 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 RNASEH2AO75792 299 aaKnown RBP12.07□□□□□ -0.48
PCCB-214ENST00000478469 TFEBP19484 476 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 PSMD8P48556 350 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 AQP5P55064 265 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 SCAPQ12770 1279 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 ESRP1Q6NXG1 681 aaKnown RBP12.07□□□□□ -0.48
PCCB-214ENST00000478469 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
PCCB-214ENST00000478469 EXOC3L1Q86VI1 746 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms