RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 K7ENP7 123 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 PCCBP05166 539 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 ITGA2BP08514 1039 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 MLLT3P42568 568 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 SRP54P61011 504 aaKnown RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 CLN3Q13286 438 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 INPP5AQ14642 412 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 GRM3Q14832 879 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 NFATC4Q14934 902 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 UGP2Q16851 508 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 CFAP58Q5T655 872 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 CDKAL1Q5VV42 579 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 ERAP2Q6P179 960 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 DNAJC24Q6P3W2 148 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 INO80CQ6PI98 192 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 GKN2Q86XP6 184 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 UMODL1-AS1Q8N2C9 162 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 SDR16C5Q8N3Y7 309 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 HCAR2Q8TDS4 363 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 LIN37Q96GY3 246 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 MCEEQ96PE7 176 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 GFM1Q96RP9 751 aaKnown RBP11.85□□□□□ -0.51
CPSF7-211ENST00000477890 APOOQ9BUR5 198 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 CHMP5Q9NZZ3 219 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 KLQ9UEF7 1012 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 SIK3Q9Y2K2 1263 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 CFAP46Q8IYW2 2715 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 ATMQ13315 3056 aa11.85□□□□□ -0.51
CPSF7-211ENST00000477890 TSPAN11A1L157 253 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 D6RAR5 112 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 J3KR12 359 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 PLD2O14939 933 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 FGF10O15520 208 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-211ENST00000477890 PRKCGP05129 697 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
CPSF7-211ENST00000477890 LIG3P49916 1009 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 AIF1P55008 147 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 TPI1P60174 286 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
CPSF7-211ENST00000477890 CCL7P80098 99 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 BRAT1Q6PJG6 821 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 MON1BQ7L1V2 547 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 RAB11FIP2Q7L804 512 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 JAMLQ86YT9 394 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 FBXO39Q8N4B4 442 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 ATL2Q8NHH9 583 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 FOXP3Q9BZS1 431 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 STRADBQ9C0K7 418 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
CPSF7-211ENST00000477890 UNC13CQ8NB66 2214 aa11.84□□□□□ -0.51
CPSF7-211ENST00000477890 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 A0A1W2PQM1 296 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 TCRBV5S1A1TA0A578 114 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 B8ZZF3 427 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 TMX2-CTNND1H3BSU7 103 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 BUB1BO60566 1050 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 TNFP01375 233 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 HGFP14210 728 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 DESP17661 470 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 SLC5A2P31639 672 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 UGT1A5P35504 534 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 MMP12P39900 470 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 INHBCP55103 352 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 EIF3IQ13347 325 aaKnown RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 MTM1Q13496 603 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 AGERQ15109 404 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 KCTD16Q68DU8 428 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 DCUN1D2Q6PH85 259 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 ZSWIM9Q86XI8 627 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 CAMK1DQ8IU85 385 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 PAF1Q8N7H5 531 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 PLA2G15Q8NCC3 412 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 OR6C4Q8NGE1 309 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 MED8Q96G25 268 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 PDXPQ96GD0 296 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 CELF6Q96J87 481 aaKnown RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 ZNF641Q96N77 438 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 TUBGCP5Q96RT8 1024 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 CCNL2Q96S94 520 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-211ENST00000477890 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 CNPY3Q9BT09 278 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 LRRC19Q9H756 370 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 GPATCH2LQ9NWQ4 482 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 DONSONQ9NYP3 566 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
CPSF7-211ENST00000477890 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms