RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FAM47EQ6ZV65 393 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 GAREM2Q75VX8 874 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 WDR75Q8IWA0 830 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 MFN1Q8IWA4 741 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 UNC5BQ8IZJ1 945 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SLC25A41Q8N5S1 370 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 ARL14EPQ8N8R7 260 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 TDRD5Q8NAT2 981 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 FIBINQ8TAL6 211 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 TTC8Q8TAM2 541 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SPPL3Q8TCT6 385 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 AUTS2Q8WXX7 1259 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 ISG20Q96AZ6 181 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 TRIB3Q96RU7 358 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 AGAP2Q99490 1192 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 LBHD1Q9BQE6 289 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 TRIM56Q9BRZ2 755 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 TDRD1Q9BXT4 1180 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 NMRAL1Q9HBL8 299 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SAR1AQ9NR31 198 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 TXLNGQ9NUQ3 528 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 MRGBPQ9NV56 204 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 INTS10Q9NVR2 710 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 COPG2Q9UBF2 871 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 VPS28Q9UK41 221 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 PRDM4Q9UKN5 801 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 OR51B4Q9Y5P0 310 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 COMMD10Q9Y6G5 202 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 FAM95CA0A1B0GW59 222 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SLCO1B7G3V0H7 640 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 H7C0S8 307 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 LEFTY2O00292 366 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TRAFD1O14545 582 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 LDB2O43679 373 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CCDC22O60826 627 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TRIM13O60858 407 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TMCC1O94876 653 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 PAPLNO95428 1278 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 GLP2RO95838 553 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 PENKP01210 267 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 RBP1P09455 135 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 BGNP21810 368 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CD9P21926 228 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 LPOP22079 712 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 NFKBIAP25963 317 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 ARNTP27540 789 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 PPARGP37231 505 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 AVPR1AP37288 418 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CHRNA4P43681 627 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 GRIA4P48058 902 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SCNN1BP51168 640 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 ARFIP2P53365 341 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 ARF5P84085 180 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 OCRLQ01968 901 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 BNIP1Q12981 228 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CHI3L2Q15782 390 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TBCCQ15814 346 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 FAM83EQ2M2I3 478 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 GALNTL6Q49A17 601 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 FASTKD1Q53R41 847 aaKnown RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 AARS2Q5JTZ9 985 aaKnown RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 AGAP9Q5VTM2 703 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 ZNF470Q6ECI4 717 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 FAM45BPQ6NSW5 357 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 NCEH1Q6PIU2 408 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 AFTPHQ6ULP2 937 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 RAPH1Q70E73 1250 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TMCO2Q7Z6W1 182 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 TBC1D1Q86TI0 1168 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CARNMT1Q8N4J0 409 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 MAB21L3Q8N8X9 362 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 OR13J1Q8NGT2 312 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 FAM45AQ8TCE6 357 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 DDI1Q8WTU0 396 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 PDCD6IPQ8WUM4 868 aaKnown RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 POF1BQ8WVV4 589 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 C10orf82Q8WW14 230 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 MYEOVQ96EZ4 313 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TUBGCP5Q96RT8 1024 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 TTC1Q99614 292 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SLC2A11Q9BYW1 496 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 WWP1Q9H0M0 922 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 LMAN2LQ9H0V9 348 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 NOD2Q9HC29 1040 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SLCO1B3Q9NPD5 702 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 NLE1Q9NVX2 485 aaPredicted RBP7.98□□□□□ -1.13
VMA21-203ENST00000477649 SMPD4Q9NXE4 827 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 CFAP97Q9P2B7 532 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SLC39A10Q9ULF5 831 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 SLC12A4Q9UP95 1085 aa7.98□□□□□ -1.13
VMA21-203ENST00000477649 WDR91A4D1P6 747 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ANKRD66B4E2M5 251 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 H0YHG0 523 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 MUSKO15146 869 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms