RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PIGNO95427 931 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 CSF2P04141 144 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 GIMD1P0DJR0 217 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 CKMT1AP12532 417 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 NME1P15531 152 aaKnown RBP16.34■□□□□ 0.21
COL1A1-205ENST00000476387 SERPINA4P29622 427 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 RENBPP51606 427 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 CLDN6P56747 220 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 DAB2P98082 770 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 INSM1Q01101 510 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-205ENST00000476387 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 LBRQ14739 615 aaKnown RBP16.34■□□□□ 0.21
COL1A1-205ENST00000476387 RTP5Q14D33 572 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 PDK2Q15119 407 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 COL28A1Q2UY09 1125 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 LRRC73Q5JTD7 316 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 SRLQ86TD4 932 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 PARGQ86W56 976 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 CPNE8Q86YQ8 564 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 BBS5Q8N3I7 341 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 DCBLD1Q8N8Z6 715 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 FAM181AQ8N9Y4 354 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 TSEN2Q8NCE0 465 aaKnown RBP16.34■□□□□ 0.21
COL1A1-205ENST00000476387 FAM71BQ8TC56 605 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 MRFAP1L1Q96HT8 127 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 TUBGCP5Q96RT8 1024 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 ZNF670Q9BS34 389 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 ATP13A3Q9H7F0 1226 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 EVA1BQ9NVM1 165 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 DNAJC28Q9NX36 388 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 INTUQ9ULD6 942 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 ITM2BQ9Y287 266 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 CSNK1G3Q9Y6M4 447 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 H3BM21 787 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 TOR1BO14657 336 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 GP1BAP07359 652 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 CD48P09326 243 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 ARHGAP25P42331 645 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 CSNK1DP48730 415 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 SUOXP51687 545 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 TAS2R40P59535 323 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 PFN3P60673 137 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 ELP6Q0PNE2 266 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 PDZD3Q86UT5 571 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 CXorf40AQ8TE69 158 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-205ENST00000476387 C1QTNF7Q9BXJ2 289 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 SUV39H2Q9H5I1 410 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.2
COL1A1-205ENST00000476387 GGT7Q9UJ14 662 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 CLCA2Q9UQC9 943 aa16.33■□□□□ 0.2
COL1A1-205ENST00000476387 IGSF10Q6WRI0 2623 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 K7ESM1 405 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 MFSD11O43934 449 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 MTA2O94776 668 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 HSPA9P38646 679 aaKnown RBP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 RGRP47804 291 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 DUSP3P51452 185 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 ARSEP51690 589 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 AP1S1P61966 158 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 NSUN2Q08J23 767 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 PDE1CQ14123 709 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 ATP13A4Q4VNC1 1196 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 ANKRD20A8PQ5CZ79 823 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 ERAP2Q6P179 960 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 BRAT1Q6PJG6 821 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 LRRC49Q8IUZ0 686 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 ZNF548Q8NEK5 533 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 HCAR2Q8TDS4 363 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 HNRNPLLQ8WVV9 542 aaKnown RBP16.32■□□□□ 0.2
COL1A1-205ENST00000476387 CENPTQ96BT3 561 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 PSKH2Q96QS6 385 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 NCKIPSDQ9NZQ3 722 aa16.32■□□□□ 0.2
COL1A1-205ENST00000476387 MYLKQ15746 1914 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 MAFKO60675 156 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 MT-CO3P00414 261 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 TIMP2P16035 220 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 IL4RP24394 825 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-205ENST00000476387 MAGEA1P43355 309 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 SCNN1BP51168 640 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 BCL2L1Q07817 233 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 SLC10A7Q0GE19 358 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 PTK2BQ14289 1009 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 SPA17Q15506 151 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 ODF2Q5BJF6 829 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 ZNF542PQ5EBM4 170 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 ZCCHC8Q6NZY4 707 aaKnown RBP16.31■□□□□ 0.2
COL1A1-205ENST00000476387 CAMK1DQ8IU85 385 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 CCDC170Q8IYT3 715 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 BTN2A2Q8WVV5 523 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 APOLD1Q96LR9 279 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 TBATAQ96M53 351 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 WRAP53Q9BUR4 548 aaKnown RBP16.31■□□□□ 0.2
COL1A1-205ENST00000476387 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
COL1A1-205ENST00000476387 ASXL3Q9C0F0 2248 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms