RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MEI4A8MW99 385 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 ENC1O14682 589 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 BCAT2O15382 392 aaPredicted RBP17.04■□□□□ 0.32
SCAF11-206ENST00000474828 LIASO43766 372 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 FSBPO95073 299 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 EPOP01588 193 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 PDHA1P08559 390 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 PRLRP16471 622 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 MAOBP27338 520 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 GRIA4P48058 902 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 RACK1P63244 317 aaKnown RBP17.04■□□□□ 0.32
SCAF11-206ENST00000474828 FGL2Q14314 439 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 CCNG2Q16589 344 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 SETMARQ53H47 684 aaPredicted RBP17.04■□□□□ 0.32
SCAF11-206ENST00000474828 DPPA4Q7L190 304 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
SCAF11-206ENST00000474828 KLF6Q99612 283 aaPredicted RBP17.04■□□□□ 0.32
SCAF11-206ENST00000474828 CEP41Q9BYV8 373 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 TM9SF3Q9HD45 589 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 GGT7Q9UJ14 662 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 DNPEPQ9ULA0 475 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 FAM186AA6NE01 2351 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 A0A0J9YYE9 177 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 FAM47DPA6NHR8 397 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 H7C0C1 242 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 GCATO75600 419 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 CPP00450 1065 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 TRBC1P01850 177 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
SCAF11-206ENST00000474828 GNSP15586 552 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ITIH2P19823 946 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 CA4P22748 312 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 CD86P42081 329 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ATP5OP48047 213 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 AFF3P51826 1226 aaKnown RBP17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ITKQ08881 620 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 SPEM2Q0P670 501 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
SCAF11-206ENST00000474828 SEL1L3Q68CR1 1132 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 IQCHQ86VS3 1027 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 DENND6BQ8NEG7 585 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 MAIP1Q8WWC4 291 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 SPATA13Q96N96 652 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 FERMT1Q9BQL6 677 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 GORASP1Q9BQQ3 440 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 SLC17A9Q9BYT1 436 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 GBA3Q9H227 469 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 GPR27Q9NS67 375 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ITM2BQ9Y287 266 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 DRG1Q9Y295 367 aaKnown RBP17.03■□□□□ 0.32
SCAF11-206ENST00000474828 ANKRD36A6QL64 1941 aa17.03■□□□□ 0.32
SCAF11-206ENST00000474828 DMXL1Q9Y485 3027 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 LOC285095A0A1B0GVY8 99 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 PATE3B3GLJ2 98 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 PRAMEF26H0Y7S4 382 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 WNT9AO14904 365 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 VILLO15195 856 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 OPHN1O60890 802 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 PCDH8O95206 1070 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 FGGP02679 453 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ITGAVP06756 1048 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 GM2AP17900 193 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 NFKB1P19838 968 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 STIP1P31948 543 aaKnown RBP17.02■□□□□ 0.32
SCAF11-206ENST00000474828 BNC1Q01954 994 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 OVGP1Q12889 678 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 CDKN3Q16667 212 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ANKRD20A2Q5SQ80 823 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 CFAP58Q5T655 872 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ANKRD20A1Q5TYW2 823 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ANKRD20A3Q5VUR7 823 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ERAP2Q6P179 960 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 DARS2Q6PI48 645 aaKnown RBP17.02■□□□□ 0.32
SCAF11-206ENST00000474828 PRR23CQ6ZRP0 262 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ABI3BPQ7Z7G0 1075 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 RGL4Q8IZJ4 473 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 FAM174AQ8TBP5 190 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ACTRT1Q8TDG2 376 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 OXNAD1Q96HP4 312 aaPredicted RBP17.02■□□□□ 0.32
SCAF11-206ENST00000474828 RBM15Q96T37 977 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAF11-206ENST00000474828 FAM118BQ9BPY3 351 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 ZDHHC5Q9C0B5 715 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 C10orf88Q9H8K7 445 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 PCDH9Q9HC56 1237 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 SEPT10Q9P0V9 454 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
SCAF11-206ENST00000474828 CACNA1EQ15878 2313 aa17.02■□□□□ 0.31
SCAF11-206ENST00000474828 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
SCAF11-206ENST00000474828 LNP1A1A4G5 178 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 IGLON5A6NGN9 336 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 ANKRD66B4E2M5 251 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 PSMD11O00231 422 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms