RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 KRT7P08729 469 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 CKMT1AP12532 417 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 NME1P15531 152 aaKnown RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 HTR1BP28222 390 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 ARHGAP25P42331 645 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 RPIAP49247 311 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 SUOXP51687 545 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 NDST2P52849 883 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 NAP1L1P55209 391 aaKnown RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 SERINC3Q13530 473 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 FGL2Q14314 439 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 FZD2Q14332 565 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 DPYSL2Q16555 572 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 FAXCQ5TGI0 409 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 ZCCHC8Q6NZY4 707 aaKnown RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 PDZD3Q86UT5 571 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 UMODL1-AS1Q8N2C9 162 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 KCTD6Q8NC69 237 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 MAPK15Q8TD08 544 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 C1QTNF2Q9BXJ5 285 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 NRSN2Q9GZP1 204 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 ATP13A3Q9H7F0 1226 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 CWC15Q9P013 229 aaKnown RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 SPASTQ9UBP0 616 aa15.27■□□□□ 0.04
VARS-223ENST00000474643 EPN1Q9Y6I3 576 aaPredicted RBP15.27■□□□□ 0.04
VARS-223ENST00000474643 ACACAQ13085 2346 aa15.27■□□□□ 0.03
VARS-223ENST00000474643 ZFYVE26Q68DK2 2539 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 CPED1A4D0V7 1026 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 K7ESM1 405 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 LZTS3O60299 673 aaPredicted RBP15.26■□□□□ 0.03
VARS-223ENST00000474643 PALMO75781 387 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 PIGNO95427 931 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 MT-CO3P00414 261 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 TNNT1P13805 278 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 SERPINA4P29622 427 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 MAN1A1P33908 653 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 ACTN2P35609 894 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 HCAR3P49019 387 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 BLKP51451 505 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 PRRT3Q5FWE3 981 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 TXNRD3NBQ6F5E7 133 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 TMCO3Q6UWJ1 677 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 KIAA1328Q86T90 577 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 MAP7D3Q8IWC1 876 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 LRRC8AQ8IWT6 810 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 IFI44Q8TCB0 444 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 SCG3Q8WXD2 468 aaKnown RBP15.26■□□□□ 0.03
VARS-223ENST00000474643 ASB12Q8WXK4 309 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 SYNDIG1Q9H7V2 258 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 PCDH18Q9HCL0 1135 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 DKK3Q9UBP4 350 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 DOCK9Q9BZ29 2069 aa15.26■□□□□ 0.03
VARS-223ENST00000474643 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CELSR3Q9NYQ7 3312 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 SPOPO43791 374 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 OPA1O60313 960 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 MTA2O94776 668 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 LCA5LO95447 670 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 ANXA6P08133 673 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CTSEP14091 401 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 AMPD1P23109 780 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 YPEL5P62699 121 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 LRRC14Q15048 493 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 NR0B2Q15466 257 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CDKN3Q16667 212 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 DEFB133Q30KQ1 61 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 BRAT1Q6PJG6 821 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 POLNQ7Z5Q5 900 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 PHACTR4Q8IZ21 702 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 ATL2Q8NHH9 583 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CSPG4P5Q96PW8 444 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CPEB1Q9BZB8 566 aaKnown RBP15.25■□□□□ 0.03
VARS-223ENST00000474643 KLC2Q9H0B6 622 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 SUV39H2Q9H5I1 410 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 NOL6Q9H6R4 1146 aaKnown RBP15.25■□□□□ 0.03
VARS-223ENST00000474643 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 CSNK1G3Q9Y6M4 447 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 APC2O95996 2303 aa15.25■□□□□ 0.03
VARS-223ENST00000474643 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 AREL1O15033 823 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 INSIG1O15503 277 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 BRINP1O60477 761 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 PRAMEF11O60813 436 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 GP1BAP07359 652 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 MYF5P13349 255 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 TIMP2P16035 220 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 SERPINB6P35237 376 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 IGFALSP35858 605 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 SLC1A1P43005 524 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 PAPOLAP51003 745 aaKnown RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 TAS2R40P59535 323 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 PFN3P60673 137 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 PPARDQ03181 441 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 BCL2L1Q07817 233 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 DPYSQ14117 519 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 PDK2Q15119 407 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms