RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZNF236Q9UL36 1845 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 NYNRINQ9P2P1 1898 aaKnown RBP21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CACNG3O60359 315 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 TRMUO75648 421 aaKnown RBP21.24■□□□□ 0.99
COL18A1-207ENST00000473212 POLD2P49005 469 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 TXNL4AP83876 142 aaKnown RBP21.24■□□□□ 0.99
COL18A1-207ENST00000473212 SQLEQ14534 574 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 ARTNQ5T4W7 220 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 DCLRE1AQ6PJP8 1040 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 PLEKHH3Q7Z736 793 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 NUP93Q8N1F7 819 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 OR9I1Q8NGQ6 314 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 FAM110BQ8TC76 370 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 SMARCD1Q96GM5 515 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 PTPN18Q99952 460 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 TMEM79Q9BSE2 394 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 CAAP1Q9H8G2 361 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 TCAF1Q9Y4C2 921 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 A0A087X1B8 175 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 CAPN15O75808 1086 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 MAXP61244 160 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 ADRM1Q16186 407 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 CUZD1Q86UP6 607 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 CARM1Q86X55 608 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 C2CD4AQ8NCU7 369 aaPredicted RBP21.24■□□□□ 0.99
COL18A1-207ENST00000473212 OSBPL11Q9BXB4 747 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 NOL11Q9H8H0 719 aaKnown RBP21.24■□□□□ 0.99
COL18A1-207ENST00000473212 MEAF6Q9HAF1 191 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 SPAG4Q9NPE6 437 aa21.24■□□□□ 0.99
COL18A1-207ENST00000473212 MRPL40Q9NQ50 206 aaKnown RBP21.24■□□□□ 0.99
COL18A1-207ENST00000473212 ATP6AP2A0A1C7CYW4 349 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 PAGE1O75459 146 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 ATP6AP2O75787 350 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 MAPRE2Q15555 327 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 C14orf80Q86SX3 495 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 MRGPRX2Q96LB1 330 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 TSGA13Q96PP4 275 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 SLC39A3Q9BRY0 314 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 HAUS8Q9BT25 410 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 RBM22Q9NW64 420 aaKnown RBP eCLIP21.23■□□□□ 0.995e-6■■□□□ 12.3
COL18A1-207ENST00000473212 FBXO5Q9UKT4 447 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 A8MT66 165 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 H0YJX3 145 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 GPC4O75487 556 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 H6PDO95479 791 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 F9P00740 461 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 CPB1P15086 417 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 IHHQ14623 411 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 C9orf131Q5VYM1 1079 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 BTBD8Q5XKL5 378 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 HMBOX1Q6NT76 420 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 KLHDC8BQ8IXV7 354 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 ANKRD49Q8WVL7 239 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 TOP1MTQ969P6 601 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 PHF12Q96QT6 1004 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 FCRL5Q96RD9 977 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 FAM105AQ9NUU6 356 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 THEGQ9P2T0 379 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 SARDHQ9UL12 918 aa21.23■□□□□ 0.99
COL18A1-207ENST00000473212 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.23■□□□□ 0.99
COL18A1-207ENST00000473212 ARL5CA6NH57 179 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 POMCP01189 267 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 THP07101 528 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 SNRPB2P08579 225 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 ZNF23P17027 643 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 ADRA1AP35348 466 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 LHX1P48742 406 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 COG7P83436 770 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 PCBP1Q15365 356 aaKnown RBP eCLIP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 TECRLQ5HYJ1 363 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 PITRM1Q5JRX3 1037 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 C6orf10Q5SRN2 563 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 CLEC6AQ6EIG7 209 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 PPWD1Q96BP3 646 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 FSD1LQ9BXM9 530 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 CD300AQ9UGN4 299 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 CPA4Q9UI42 421 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 ST3GAL5Q9UNP4 418 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 TCRBV3S1A0A5B6 114 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 HAS3O00219 553 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 PLOD2O00469 737 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 MRASO14807 208 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 ANXA9O76027 345 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 YWHAQP27348 245 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 SLC7A1P30825 629 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 KCNC1P48547 511 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 KPNA2P52292 529 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 POU4F1Q01851 419 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 TRAP1Q12931 704 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 KRT80Q6KB66 452 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 OR10T2Q8NGX3 314 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 CASP10Q92851 521 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 FBRSL1Q9HCM7 1045 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 TIMMDC1Q9NPL8 285 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 TREX1Q9NSU2 369 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 ARHGEF38Q9NXL2 777 aa21.22■□□□□ 0.99
COL18A1-207ENST00000473212 CNOT6Q9ULM6 557 aaKnown RBP21.22■□□□□ 0.99
COL18A1-207ENST00000473212 MYADML2A6NDP7 307 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 OR51F1A6NGY5 319 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 IPO13O94829 963 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms