RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CFAP57Q96MR6 1250 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 HAPLN3Q96S86 360 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 SLC13A1Q9BZW2 595 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 ZYG11BQ9C0D3 744 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 NOL6Q9H6R4 1146 aaKnown RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 DNAJC12Q9UKB3 198 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 SRPK3Q9UPE1 567 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 LOXL2Q9Y4K0 774 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 LRBAP50851 2863 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 A0A1W2PQC6 194 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 C9orf172C9J069 976 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 GNA14O95837 355 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 RPLP0P05388 317 aaKnown RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 CD82P27701 267 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 CCKBRP32239 447 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 THOP1P52888 689 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 PPARDQ03181 441 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 STIM1Q13586 685 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 PTK2BQ14289 1009 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 IRF4Q15306 451 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 MACC1Q6ZN28 852 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 ZSWIM9Q86XI8 627 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 ELOA2Q8IYF1 753 aaPredicted RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 FAM71AQ8IYT1 594 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 RYBPQ8N488 228 aaPredicted RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 EMC1Q8N766 993 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 ARL10Q8N8L6 244 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 Q8N9G6 341 aaPredicted RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 GPR156Q8NFN8 814 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 OR2AP1Q8NGE2 309 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 C9orf43Q8TAL5 461 aaPredicted RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 USP7Q93009 1102 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 PMEPA1Q969W9 287 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 RAB7BQ96AH8 199 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 TMEM159Q96B96 161 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 WRAP53Q9BUR4 548 aaKnown RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 CPEB1Q9BZB8 566 aaKnown RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 LRRN3Q9H3W5 708 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 RRN3Q9NYV6 651 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 PPARGC1AQ9UBK2 798 aaKnown RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 DNAI1Q9UI46 699 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 TSR3Q9UJK0 312 aaKnown RBP9.42□□□□□ -0.9
VCL-204ENST00000472585 PLAAQ9Y263 795 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 C2CD3Q4AC94 2353 aa9.42□□□□□ -0.9
VCL-204ENST00000472585 BICDL2A1A5D9 508 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 NEMP1O14524 444 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 GPR37O15354 613 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 B4GAT1O43505 415 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 BUB1BO60566 1050 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 TM7SF2O76062 418 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 AGFG2O95081 481 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 POP4O95707 220 aaKnown RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 GSRP00390 522 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 F9P00740 461 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 FECHP22830 423 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 ADRA1BP35368 520 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 KRT9P35527 623 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 ATP11AP98196 1134 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 B4GALNT1Q00973 533 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 PTK2Q05397 1052 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 PAK1Q13153 545 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 INPP5AQ14642 412 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 EXOC3L4Q17RC7 722 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 C15orf59Q2T9L4 293 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 TMEM52BQ4KMG9 183 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 FAM102AQ5T9C2 384 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 GDPD4Q6W3E5 623 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 RD3Q7Z3Z2 195 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 PHLDB2Q86SQ0 1253 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 ZDHHC17Q8IUH5 632 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 SLITRK4Q8IW52 837 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 PELI3Q8N2H9 469 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 PLA2G15Q8NCC3 412 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 CCL4L1Q8NHW4 92 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 JPH3Q8WXH2 748 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 C18orf8Q96DM3 657 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 CCDC34Q96HJ3 373 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 NSMCE3Q96MG7 304 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 CMKLR1Q99788 373 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 APOOQ9BUR5 198 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 SEMA6CQ9H3T2 930 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 SYNCQ9H7C4 482 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 MRPL40Q9NQ50 206 aaKnown RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 ZNF71Q9NQZ8 489 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 AKAP7Q9P0M2 348 aaPredicted RBP9.41□□□□□ -0.9
VCL-204ENST00000472585 OR12D3Q9UGF7 316 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 STAP1Q9ULZ2 295 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 GPR34Q9UPC5 381 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 OR1A2Q9Y585 309 aa9.41□□□□□ -0.9
VCL-204ENST00000472585 SDK2Q58EX2 2172 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 TMEM202A6NGA9 273 aa9.4□□□□□ -0.9
VCL-204ENST00000472585 STMND1H3BQB6 276 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms