RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 KIAA1257Q9ULG3 409 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 TBC1D30Q9Y2I9 924 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CSMD2Q7Z408 3487 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 M0QYV0 167 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 CACNB4O00305 520 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-209ENST00000472116 O00370 1275 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 CREG1O75629 220 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 CBX6O95503 412 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 XPAP23025 273 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-209ENST00000472116 CLCN1P35523 988 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 CDK18Q07002 472 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
CDHR3-209ENST00000472116 NR1D2Q14995 579 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SNAP47Q5SQN1 464 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 NKAIN2Q5VXU1 208 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 KRT39Q6A163 491 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 PMF1Q6P1K2 205 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 MYO7BQ6PIF6 2116 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SLC47A2Q86VL8 602 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SFTPA2Q8IWL1 248 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 RHOT1Q8IXI2 618 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 IQCKQ8N0W5 287 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 OR56A4Q8NGH8 313 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 ZDHHC1Q8WTX9 485 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 PNPLA2Q96AD5 504 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 PSMB7Q99436 277 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
CDHR3-209ENST00000472116 OSBPL1AQ9BXW6 950 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 TRIM55Q9BYV6 548 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 ULBP3Q9BZM4 244 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SPRY4Q9C004 299 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 ZSCAN16Q9H4T2 348 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM8AQ9HCN3 771 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 ST7Q9NRC1 585 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 KBTBD4Q9NVX7 518 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 OR1A2Q9Y585 309 aa10.32□□□□□ -0.76
CDHR3-209ENST00000472116 SYNJ2BP-COX16A0A087WUM0 186 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 A8MU76 341 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 KRIT1O00522 736 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 NADKO95544 446 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 DLGAP3O95886 979 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 RECKO95980 971 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 FYNP06241 537 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 FURINP09958 794 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 CCNYL3P0C7X3 344 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 TRIM49P0CI25 452 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 TRIM49CP0CI26 452 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 DRD2P14416 443 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 STAT1P42224 750 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 SERPINH1P50454 418 aaKnown RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 CCL11P51671 97 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 GPLD1P80108 840 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 DNM1Q05193 864 aaKnown RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 INPP5AQ14642 412 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 SYPL2Q5VXT5 272 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 LCLAT1Q6UWP7 414 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 C6orf15Q6UXA7 325 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 BEND5Q7L4P6 421 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 SETD3Q86TU7 594 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM135Q86UB9 458 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 BMPERQ8N8U9 685 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 OR10G6Q8NH81 332 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 SLC35F5Q8WV83 523 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
CDHR3-209ENST00000472116 THAP4Q8WY91 577 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 HDAC11Q96DB2 347 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 SPON2Q9BUD6 331 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 GSDMCQ9BYG8 508 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 TM6SF2Q9BZW4 377 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM168Q9H0V1 697 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 COX16Q9P0S2 106 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 CLIC4Q9Y696 253 aa10.31□□□□□ -0.76
CDHR3-209ENST00000472116 IGHV1OR21-1A0A087WYE8 117 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 AREL1O15033 823 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 MAPK13O15264 365 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 KRT86O43790 486 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
CDHR3-209ENST00000472116 PPP6R2O75170 966 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 RHOBTB3O94955 611 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 PCCBP05166 539 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 UGT2B4P06133 528 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 TIMP2P16035 220 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 F8A1P23610 371 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 NFKBIAP25963 317 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 CSF2RBP32927 897 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 HDAC4P56524 1084 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 CDK17Q00537 523 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 PPP3CAQ08209 521 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 ILF3Q12906 894 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDHR3-209ENST00000472116 MTM1Q13496 603 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 SQSTM1Q13501 440 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 RAPGEF1Q13905 1077 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 POLD3Q15054 466 aaPredicted RBP10.3□□□□□ -0.76
CDHR3-209ENST00000472116 STILQ15468 1287 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms