RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PDE1BQ01064 536 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 RUNX3Q13761 415 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 GAS6Q14393 721 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 GRM3Q14832 879 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 CRYMQ14894 314 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 PON2Q15165 354 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 PDGFRLQ15198 375 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 PCID2Q5JVF3 399 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 FAXCQ5TGI0 409 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 UNC5AQ6ZN44 842 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 ARHGAP36Q6ZRI8 547 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 MARK2Q7KZI7 788 aaKnown RBP9.24□□□□□ -0.93
PTPRE-207ENST00000471218 GALNT7Q86SF2 657 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 DNAAF3Q8N9W5 541 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 ARRDC2Q8TBH0 407 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 WFIKKN2Q8TEU8 576 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 ARL8AQ96BM9 186 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 XPO6Q96QU8 1125 aaKnown RBP9.24□□□□□ -0.93
PTPRE-207ENST00000471218 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 CYP2S1Q96SQ9 504 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 CINPQ9BW66 212 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-207ENST00000471218 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 MUC3BQ9H195 1237 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 ARRDC1-AS1Q9H2J1 176 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 MKS1Q9NXB0 559 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 TTLL3Q9Y4R7 772 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 MAD1L1Q9Y6D9 718 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 FAM169AQ9Y6X4 670 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 ANAPC1Q9H1A4 1944 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 CHD5Q8TDI0 1954 aa9.24□□□□□ -0.93
PTPRE-207ENST00000471218 SDK1Q7Z5N4 2213 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 J3KR12 359 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 TM4SF5O14894 197 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PRPF4O43172 522 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SHOX2O60902 331 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SOCS5O75159 536 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SIN3BO75182 1162 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 NDST3O95803 873 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ADH1CP00326 375 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 C1QAP02745 245 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 KCNA4P22459 653 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 DPP6P42658 865 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 MSH2P43246 934 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PPP2R2AP63151 447 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ZXDBP98169 803 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 MGAT5Q09328 741 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SLC10A7Q0GE19 358 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 UGP2Q16851 508 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 TMEM196Q5HYL7 178 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 STPG1Q5TH74 334 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 RNF219Q5W0B1 726 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 KIAA0930Q6ICG6 404 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 DENND5AQ6IQ26 1287 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 KIAA0408Q6ZU52 694 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 B4GALNT4Q76KP1 1039 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 CCDC91Q7Z6B0 441 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 KIAA0907Q7Z7F0 614 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PRPF39Q86UA1 669 aaKnown RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 LCA5Q86VQ0 697 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 CIR1Q86X95 450 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ZNF354CQ86Y25 554 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 CFAP52Q8N1V2 620 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 KDM1BQ8NB78 822 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PPHLN1Q8NEY8 458 aaKnown RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ACMSDQ8TDX5 336 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 DDI1Q8WTU0 396 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 MYEOVQ96EZ4 313 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ALG14Q96F25 216 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ZNF419Q96HQ0 510 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 LMLNQ96KR4 655 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 MRGPRX2Q96LB1 330 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PWWP2AQ96N64 755 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 PAFAH2Q99487 392 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ADGRE3Q9BY15 652 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 NT5MQ9NPB1 228 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 SPHK2Q9NRA0 654 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ABCB8Q9NUT2 735 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 DNAJC17Q9NVM6 304 aaKnown RBP9.23□□□□□ -0.93
PTPRE-207ENST00000471218 GTSE1Q9NYZ3 720 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 HACD3Q9P035 362 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 EBF1Q9UH73 591 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 VPS28Q9UK41 221 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 ADAM21Q9UKJ8 722 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 HS3ST2Q9Y278 367 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 CFAP47Q6ZTR5 3102 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 OBSL1O75147 1896 aa9.23□□□□□ -0.93
PTPRE-207ENST00000471218 FAM208BQ5VWN6 2430 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SPAG17Q6Q759 2223 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 A0A0D9SEW6 157 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 INSIG1O15503 277 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms