RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SATB1Q01826 763 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 TBL3Q12788 808 aaKnown RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 ELAVL2Q12926 359 aaKnown RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 CRHR2Q13324 411 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 MSLNQ13421 630 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 ART3Q13508 389 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 OLIG2Q13516 323 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 CYLC2Q14093 348 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 LPIN1Q14693 890 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 KCNA10Q16322 511 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 PSMD5Q16401 504 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 NOMO2Q5JPE7 1267 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SH2D4BQ5SQS7 431 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 FAM182AQ5T1J6 154 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 MANEALQ5VSG8 457 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 NXNQ6DKJ4 435 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ZNF280DQ6N043 979 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 NEPROQ6NW34 567 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 RAB44Q7Z6P3 723 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 GALNT7Q86SF2 657 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ADGRG6Q86SQ4 1221 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 MYLK4Q86YV6 388 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 SLC41A1Q8IVJ1 513 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ARHGAP12Q8IWW6 846 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 UMODL1-AS1Q8N2C9 162 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMC4-212ENST00000470240 ZNF781Q8N8C0 355 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 CATSPER1Q8NEC5 780 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 TRPV1Q8NER1 839 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 STYXQ8WUJ0 223 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 WDR60Q8WVS4 1066 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 CASP10Q92851 521 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 FBXO32Q969P5 355 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 CNDP1Q96KN2 507 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 BTN2A3PQ96KV6 586 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 GATA5Q9BWX5 397 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 FTHL17Q9BXU8 183 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 RHOBTB2Q9BYZ6 727 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ZCWPW1Q9H0M4 648 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 Q9H521 79 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 RETREG1Q9H6L5 497 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 ANLNQ9NQW6 1124 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SPATS2LQ9NUQ6 558 aaKnown RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 CPSF2Q9P2I0 782 aaKnown RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 EPS15L1Q9UBC2 864 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SLC7A8Q9UHI5 535 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SFMBT1Q9UHJ3 866 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 FBXO5Q9UKT4 447 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 GPC6Q9Y625 555 aaPredicted RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 HS3ST4Q9Y661 456 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.06□□□□□ -1.12
SMC4-212ENST00000470240 CASP8AP2Q9UKL3 1982 aa8.06□□□□□ -1.12
SMC4-212ENST00000470240 MIA3Q5JRA6 1907 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 FNDC1Q4ZHG4 1894 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 A0A1W2PQH9 124 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 RGSL1A5PLK6 1076 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 KCNU1A8MYU2 1149 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 E9PBE3 544 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 H7C4K7 107 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 MATN2O00339 956 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 NEMP1O14524 444 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PHGDHO43175 533 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC7A4O43246 635 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 MSI1O43347 362 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 CA12O43570 354 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 MGEA5O60502 916 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 KLHL41O60662 606 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TBX10O75333 385 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 MT-CYBP00156 380 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 IGHA2P01877 340 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 LTA4HP09960 611 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 FAM157BP0CG42 384 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC35E2BP0CK96 405 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CPB1P15086 417 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CD33P20138 364 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 YWHAQP27348 245 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 HOXD10P28358 340 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC26A3P40879 764 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC1A2P43004 574 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 MAPKAPK2P49137 400 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 NUDT2P50583 147 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 AFF1P51825 1210 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 MLLT6P55198 1093 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 WNT3AP56704 352 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 YBEYP58557 167 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 RPL26P61254 145 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 TNP2Q05952 138 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 IL10RBQ08334 325 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 KLF10Q13118 480 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TUBB3Q13509 450 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ITGA7Q13683 1181 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ZNF235Q14590 738 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 PCSK7Q16549 785 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms