RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LSM8O95777 96 aaKnown RBP12.3□□□□□ -0.44
UBR4-211ENST00000467272 HOXC4P09017 264 aaPredicted RBP12.3□□□□□ -0.44
UBR4-211ENST00000467272 CYP11B1P15538 503 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 GM2AP17900 193 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 TRIM23P36406 574 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 TLE1Q04724 770 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 INPP5AQ14642 412 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 C16orf72Q14CZ0 275 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 POLD3Q15054 466 aaPredicted RBP12.3□□□□□ -0.44
UBR4-211ENST00000467272 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 C2CD6Q53TS8 623 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 HID1Q8IV36 788 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 CXorf40AQ8TE69 158 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 CASKIN2Q8WXE0 1202 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 OR1E3Q8WZA6 343 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 USP7Q93009 1102 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 PDXPQ96GD0 296 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 GDAP1L1Q96MZ0 367 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 WRAP53Q9BUR4 548 aaKnown RBP12.3□□□□□ -0.44
UBR4-211ENST00000467272 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 LHX3Q9UBR4 397 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 RWDD2AQ9UIY3 292 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 OR1A2Q9Y585 309 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 PCDHGA3Q9Y5H0 932 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 RNF215Q9Y6U7 377 aa12.3□□□□□ -0.44
UBR4-211ENST00000467272 CFAP69A5D8W1 941 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 ZSCAN5CA6NGD5 496 aaPredicted RBP12.29□□□□□ -0.44
UBR4-211ENST00000467272 INSIG1O15503 277 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 B4GAT1O43505 415 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 PPFIA2O75334 1257 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 JMJD7P0C870 316 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 MMP12P39900 470 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 BPIFB4P59827 614 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 NOMO3P69849 1222 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 MANEAQ5SRI9 462 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 ZSWIM9Q86XI8 627 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 RYBPQ8N488 228 aaPredicted RBP12.29□□□□□ -0.44
UBR4-211ENST00000467272 PLA2G15Q8NCC3 412 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 ZNF564Q8TBZ8 553 aaPredicted RBP12.29□□□□□ -0.44
UBR4-211ENST00000467272 NKD1Q969G9 470 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 SEMA6CQ9H3T2 930 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 FGF22Q9HCT0 170 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 DNAI1Q9UI46 699 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 TUBD1Q9UJT1 453 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 COQ6Q9Y2Z9 468 aa12.29□□□□□ -0.44
UBR4-211ENST00000467272 LRBAP50851 2863 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 C2CD4BA6NLJ0 364 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 BIN1O00499 593 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 TNFRSF10CO14798 259 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 RAMP2O60895 175 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 FGFR1OPO95684 399 aaKnown RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 NTRK1P04629 796 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 PTPN9P43378 593 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 HDAC4P56524 1084 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 FOXK1P85037 733 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 MTM1Q13496 603 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 UBAP2LQ14157 1087 aaKnown RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 CYTH1Q15438 398 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 CLPPQ16740 277 aaPredicted RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 UGP2Q16851 508 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 C14orf28Q4W4Y0 310 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 MIIPQ5JXC2 388 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 NOP9Q86U38 636 aaKnown RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 EMC1Q8N766 993 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 HMCESQ96FZ2 354 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 WDR92Q96MX6 357 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 SPRY4Q9C004 299 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 EPN3Q9H201 632 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 SYNDIG1Q9H7V2 258 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 PDFQ9HBH1 243 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 PCDH12Q9NPG4 1184 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 KLQ9UEF7 1012 aa12.28□□□□□ -0.44
UBR4-211ENST00000467272 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
UBR4-211ENST00000467272 LRRK1Q38SD2 2015 aa12.27□□□□□ -0.44
UBR4-211ENST00000467272 WASH4PA8MWX3 477 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.45
UBR4-211ENST00000467272 CYP1A1P04798 512 aaPredicted RBP12.27□□□□□ -0.45
UBR4-211ENST00000467272 PLEKP08567 350 aaPredicted RBP12.27□□□□□ -0.45
UBR4-211ENST00000467272 FGF3P11487 239 aaPredicted RBP12.27□□□□□ -0.45
UBR4-211ENST00000467272 CCL4P13236 92 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 CTSEP14091 401 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 MMP8P22894 467 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 HTR1BP28222 390 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 LIG3P49916 1009 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 RALGDSQ12967 914 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 SERINC3Q13530 473 aa12.27□□□□□ -0.45
UBR4-211ENST00000467272 TCEA2Q15560 299 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms