RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CORO1BQ9BR76 489 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 FEM1AQ9BSK4 669 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 NMRAL1Q9HBL8 299 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 CFAP97Q9P2B7 532 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 TLK1Q9UKI8 766 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 OR51B4Q9Y5P0 310 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 NDST3O95803 873 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 GLUD1P00367 558 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 PIRTP0C851 137 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 MYL4P12829 197 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 C1QTNF8P60827 252 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 SLC14A2Q15849 920 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 PNPLA1Q8N8W4 532 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 MRPL43Q8N983 215 aaKnown RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 SLC7A6OSQ96CW6 309 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 LRMDAQ9H2I8 198 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 HCFC1R1Q9NWW0 138 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 CPSF2Q9P2I0 782 aaKnown RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 ARL5AQ9Y689 179 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 CHD9Q3L8U1 2897 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 NOTCH4Q99466 2003 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 FAM95CA0A1B0GW59 222 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 DNAJC6O75061 913 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 ZNF460Q14592 562 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 PTPRCAPQ14761 206 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 ZNF789Q5FWF6 425 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 ATG14Q6ZNE5 492 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 BBS7Q8IWZ6 715 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 ELMOD1Q8N336 334 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 PIWIL2Q8TC59 973 aaKnown RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 HDAC10Q969S8 669 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 C1QTNF1Q9BXJ1 281 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 NMUR2Q9GZQ4 415 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 SCUBE2Q9NQ36 999 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 SAR1AQ9NR31 198 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 LSM7Q9UK45 103 aaKnown RBP18.37■□□□□ 0.53
COL9A3-205ENST00000466192 DNAJC16Q9Y2G8 782 aa18.37■□□□□ 0.53
COL9A3-205ENST00000466192 TRAV19A0A0A6YYK7 116 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 TYW5A2RUC4 315 aaKnown RBP18.36■□□□□ 0.53
COL9A3-205ENST00000466192 SLC7A4O43246 635 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 BUD23O43709 281 aaKnown RBP18.36■□□□□ 0.53
COL9A3-205ENST00000466192 TMCC1O94876 653 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 SLC35E2BP0CK96 405 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 GRK2P25098 689 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CDC25CP30307 473 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 ARRB2P32121 409 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CSKP41240 450 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CCR2P41597 374 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CD151P48509 253 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CNSTQ6PJW8 725 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 KIAA0408Q6ZU52 694 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 SPRED2Q7Z698 418 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 PTAR1Q7Z6K3 402 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-205ENST00000466192 CEP97Q8IW35 865 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 POF1BQ8WVV4 589 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 ALG14Q96F25 216 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 SLC46A2Q9BY10 475 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 ARL8BQ9NVJ2 186 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 ARMCX1Q9P291 453 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 VPS28Q9UK41 221 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
COL9A3-205ENST00000466192 G3V2L1 256 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 FCHO1O14526 889 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 RASSF2P50749 326 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 CDH18Q13634 790 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 SNCBQ16143 134 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 WDR75Q8IWA0 830 aaKnown RBP18.35■□□□□ 0.53
COL9A3-205ENST00000466192 OR6P1Q8NGX9 317 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 SPPL3Q8TCT6 385 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 CALML6Q8TD86 181 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 BRSK1Q8TDC3 778 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 HERVK_113Q902F9 699 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 NUDCD1Q96RS6 583 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 EBF4Q9BQW3 602 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 WWP1Q9H0M0 922 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 SMG9Q9H0W8 520 aaKnown RBP18.35■□□□□ 0.53
COL9A3-205ENST00000466192 ASAH2Q9NR71 780 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 BAIAP2L1Q9UHR4 511 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 SH3BP1Q9Y3L3 701 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 OR51F1A6NGY5 319 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 A8MUI8 341 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 PRLP01236 227 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 GLRBP48167 497 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 CLCN4P51793 760 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 ACVR1Q04771 509 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 PPM1LQ5SGD2 360 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 GPATCH11Q8N954 259 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 TDRD5Q8NAT2 981 aaKnown RBP18.35■□□□□ 0.53
COL9A3-205ENST00000466192 PPP4R1Q8TF05 950 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 DDI1Q8WTU0 396 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 INPP5DQ92835 1189 aa18.35■□□□□ 0.53
COL9A3-205ENST00000466192 UTP4Q969X6 686 aaKnown RBP18.35■□□□□ 0.53
COL9A3-205ENST00000466192 DNAJC1Q96KC8 554 aaKnown RBP18.35■□□□□ 0.53
COL9A3-205ENST00000466192 TBATAQ96M53 351 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms