RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CPP00450 1065 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 CD68P34810 354 aaPredicted RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 AFF3P51826 1226 aaKnown RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 SKOR1P84550 965 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 FAM182AQ5T1J6 154 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 CDKL3Q8IVW4 592 aaPredicted RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 KIAA2013Q8IYS2 634 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 TTC13Q8NBP0 860 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 PIH1D2Q8WWB5 315 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 ASB12Q8WXK4 309 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 AGAP3Q96P47 875 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 NUSAP1Q9BXS6 441 aaKnown RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 SLC25A51Q9H1U9 297 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 GLOD4Q9HC38 313 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 RXFP3Q9NSD7 469 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 R3HDM2Q9Y2K5 976 aaKnown RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 PPIL1Q9Y3C6 166 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 PCDHB9Q9Y5E1 797 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 ADAMTS9Q9P2N4 1935 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 TP53BP1Q12888 1972 aaPredicted RBP20.46■□□□□ 0.87
SKA3-205ENST00000465471 USP27XA6NNY8 438 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 H7C0C1 242 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 KCNK3O14649 394 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 PRLP01236 227 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 CFIP05156 583 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 PDHA1P08559 390 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 RBP3P10745 1247 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 XPAP23025 273 aaPredicted RBP20.45■□□□□ 0.86
SKA3-205ENST00000465471 RBL1P28749 1068 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 ATP5OP48047 213 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 BNC1Q01954 994 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 LMNB2Q03252 620 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 RALGDSQ12967 914 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 ARMC12Q5T9G4 340 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 ERAP2Q6P179 960 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 DPPA4Q7L190 304 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 SLC13A5Q86YT5 568 aaPredicted RBP20.45■□□□□ 0.86
SKA3-205ENST00000465471 ZNF567Q8N184 647 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 C12orf50Q8NA57 414 aaPredicted RBP20.45■□□□□ 0.86
SKA3-205ENST00000465471 SLC35B2Q8TB61 432 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 SERAC1Q96JX3 654 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 MCCC1Q96RQ3 725 aaPredicted RBP20.45■□□□□ 0.86
SKA3-205ENST00000465471 FAM118BQ9BPY3 351 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 SLC17A9Q9BYT1 436 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 TRMT1Q9NXH9 659 aaKnown RBP20.45■□□□□ 0.86
SKA3-205ENST00000465471 PHTF1Q9UMS5 762 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 JRKLQ9Y4A0 524 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 CEP250Q9BV73 2442 aa20.45■□□□□ 0.86
SKA3-205ENST00000465471 CFAP69A5D8W1 941 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 IGLON5A6NGN9 336 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 PRAMEF26H0Y7S4 382 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 NEMP1O14524 444 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 WNT1P04628 370 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 PRKCGP05129 697 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 PRLRP16471 622 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 CD86P42081 329 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.44■□□□□ 0.86
SKA3-205ENST00000465471 CXorf40AQ8TE69 158 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 LENG8Q96PV6 779 aaPredicted RBP20.44■□□□□ 0.86
SKA3-205ENST00000465471 KLF6Q99612 283 aaPredicted RBP20.44■□□□□ 0.86
SKA3-205ENST00000465471 C10orf88Q9H8K7 445 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 USP29Q9HBJ7 922 aa20.44■□□□□ 0.86
SKA3-205ENST00000465471 ARHGAP33O14559 1287 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 VILLO15195 856 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 SLC31A1O15431 190 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 MMP20O60882 483 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 ZNF189O75820 626 aaPredicted RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 ENGP17813 658 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 HNRNPA2B1P22626 353 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 CA4P22748 312 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 CSNK1EP49674 416 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 RPL26P61254 145 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 GRIK2Q13002 908 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 AGERQ15109 404 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 AASDHQ4L235 1098 aaPredicted RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 DENND6BQ8NEG7 585 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 PDCD6IPQ8WUM4 868 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 KLK6Q92876 244 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 SCRN2Q96FV2 425 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 TRIB3Q96RU7 358 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 WRAP53Q9BUR4 548 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 EDEM2Q9BV94 578 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 ZDHHC5Q9C0B5 715 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 FSCN3Q9NQT6 498 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 B4GALT6Q9UBX8 382 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 TRHDEQ9UKU6 1024 aa20.43■□□□□ 0.86
SKA3-205ENST00000465471 RPL26L1Q9UNX3 145 aaKnown RBP20.43■□□□□ 0.86
SKA3-205ENST00000465471 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.43■□□□□ 0.86
SKA3-205ENST00000465471 A0A1B0GVT2 93 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 GDF9O60383 454 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 NFKB1P19838 968 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 CD38P28907 300 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 LIMK1P53667 647 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 SIX1Q15475 284 aaPredicted RBP20.42■□□□□ 0.86
SKA3-205ENST00000465471 TEAD4Q15561 434 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 ZNF569Q5MCW4 686 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 LAYNQ6UX15 382 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 IQCHQ86VS3 1027 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 SLC35F6Q8N357 371 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms