RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 C14orf28Q4W4Y0 310 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 IL22RA1Q8N6P7 574 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 GPBAR1Q8TDU6 330 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 VOPP1Q96AW1 172 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 CFAP57Q96MR6 1250 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 TAAR9Q96RI9 348 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 SEMA6CQ9H3T2 930 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 DPEP2Q9H4A9 486 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 NDFIP2Q9NV92 336 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 ANAPC2Q9UJX6 822 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 MFHAS1Q9Y4C4 1052 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 B4DGG1 531 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 GOLGA8SH3BPF8 625 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 TMCC1O94876 653 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 CPNE6O95741 557 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 PCCBP05166 539 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 FLT3P36888 993 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 CASRP41180 1078 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 RHOAP61586 193 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 MTM1Q13496 603 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMC1A-204ENST00000463684 C16orf72Q14CZ0 275 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 NCAPHQ15003 741 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 C4orf17Q53FE4 359 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 ERAP2Q6P179 960 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 TMPRSS9Q7Z410 1059 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 NLRP14Q86W24 1093 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 XYLT1Q86Y38 959 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 OR56A4Q8NGH8 313 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 HCAR2Q8TDS4 363 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 CASKIN2Q8WXE0 1202 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 NKD1Q969G9 470 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 HMCESQ96FZ2 354 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 NCAPGQ9BPX3 1015 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 TMEM248Q9NWD8 314 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 BSNQ9UPA5 3926 aa14.59□□□□□ -0.07
SMC1A-204ENST00000463684 CACNB4O00305 520 aaPredicted RBP14.58□□□□□ -0.08
SMC1A-204ENST00000463684 FOXN3O00409 490 aaPredicted RBP14.58□□□□□ -0.08
SMC1A-204ENST00000463684 CCL4P13236 92 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 KELP23276 732 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 PON1P27169 355 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 ADRA1BP35368 520 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 ATP11AP98196 1134 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 B4GALNT1Q00973 533 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 NRG1Q02297 640 aaPredicted RBP14.58□□□□□ -0.08
SMC1A-204ENST00000463684 UGP2Q16851 508 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 AMZ1Q400G9 498 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 CFAP58Q5T655 872 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 SPECC1LQ69YQ0 1117 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 NYAP1Q6ZVC0 841 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 BNIPLQ7Z465 357 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 ELOA2Q8IYF1 753 aaPredicted RBP14.58□□□□□ -0.08
SMC1A-204ENST00000463684 MSANTD4Q8NCY6 345 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 PDXPQ96GD0 296 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 CATSPER2Q96P56 530 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 CDH19Q9H159 772 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 RDH14Q9HBH5 336 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 DNAJC12Q9UKB3 198 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 MAN2B2Q9Y2E5 1009 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.08
SMC1A-204ENST00000463684 RHPN2P1A8MT19 583 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 HGSO14964 777 aaPredicted RBP14.57□□□□□ -0.08
SMC1A-204ENST00000463684 B4GAT1O43505 415 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 BMP6P22004 513 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 ALDH4A1P30038 563 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 CDH5P33151 784 aaPredicted RBP14.57□□□□□ -0.08
SMC1A-204ENST00000463684 LIG3P49916 1009 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 GRM3Q14832 879 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 AGERQ15109 404 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 CLPPQ16740 277 aaPredicted RBP14.57□□□□□ -0.08
SMC1A-204ENST00000463684 INO80DQ53TQ3 878 aaPredicted RBP14.57□□□□□ -0.08
SMC1A-204ENST00000463684 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 MANEALQ5VSG8 457 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 FAM26EQ8N5C1 309 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 CCDC112Q8NEF3 446 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 OR1E3Q8WZA6 343 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 TBC1D31Q96DN5 1066 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 TMEM168Q9H0V1 697 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 MOSPD1Q9UJG1 213 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
SMC1A-204ENST00000463684 FAM170AA1A519 330 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 GTPBP10A4D1E9 387 aaKnown RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 TMEM202A6NGA9 273 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 BIN1O00499 593 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 TNFRSF10CO14798 259 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 FGF3P11487 239 aaPredicted RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 LIFP15018 202 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 OR1D5P58170 312 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 KIAA1024LP59773 190 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 BIRC2Q13490 618 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 C2CD6Q53TS8 623 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 TRNP1Q6NT89 227 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 ARCQ7LC44 396 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 SFTPA2Q8IWL1 248 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 CACNA2D3Q8IZS8 1091 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 NETO2Q8NC67 525 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 PLA2G15Q8NCC3 412 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms