RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CCDC3Q9BQI4 270 aa23.47■■□□□ 1.35
SSNA1-203ENST00000463511 SEMA4CQ9C0C4 833 aa23.47■■□□□ 1.35
SSNA1-203ENST00000463511 CLPBQ9H078 707 aa23.47■■□□□ 1.35
SSNA1-203ENST00000463511 ADAM22Q9P0K1 906 aa23.47■■□□□ 1.35
SSNA1-203ENST00000463511 PCDHGA8Q9Y5G5 932 aa23.47■■□□□ 1.35
SSNA1-203ENST00000463511 CDRT15L2A8MXV6 281 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 TM7SF2O76062 418 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 TMCC1O94876 653 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 TSHRP16473 764 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 ITIH2P19823 946 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 PDX1P52945 283 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 YPEL5P62699 121 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 SKOR1P84550 965 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 C1QBPQ07021 282 aaKnown RBP23.46■■□□□ 1.35
SSNA1-203ENST00000463511 ASTE1Q2TB18 679 aaPredicted RBP23.46■■□□□ 1.35
SSNA1-203ENST00000463511 FAXCQ5TGI0 409 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 MACC1Q6ZN28 852 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 DNAAF5Q86Y56 855 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 MCOLN2Q8IZK6 566 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 CXorf40AQ8TE69 158 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 SNRNP27Q8WVK2 155 aaKnown RBP23.46■■□□□ 1.35
SSNA1-203ENST00000463511 GDAP1L1Q96MZ0 367 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 EPAS1Q99814 870 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 WRAP53Q9BUR4 548 aaKnown RBP23.46■■□□□ 1.35
SSNA1-203ENST00000463511 PIEZO2Q9H5I5 2752 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 MBNL1Q9NR56 388 aaKnown RBP23.46■■□□□ 1.35
SSNA1-203ENST00000463511 IMPACTQ9P2X3 320 aa23.46■■□□□ 1.35
SSNA1-203ENST00000463511 SSU72P8A0A1W2PR75 194 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 C2CD4BA6NLJ0 364 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 FTLP02792 175 aaPredicted RBP23.45■■□□□ 1.34
SSNA1-203ENST00000463511 CALB1P05937 261 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 CELA2BP08218 269 aaPredicted RBP23.45■■□□□ 1.34
SSNA1-203ENST00000463511 SPIDRQ14159 915 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 TCEA2Q15560 299 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 PPP1R2P3Q6NXS1 205 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 ARL14Q8N4G2 192 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 WDR36Q8NI36 951 aaKnown RBP23.45■■□□□ 1.34
SSNA1-203ENST00000463511 TTC9Q92623 222 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 CCDC97Q96F63 343 aaPredicted RBP23.45■■□□□ 1.34
SSNA1-203ENST00000463511 TBATAQ96M53 351 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 C1QTNF7Q9BXJ2 289 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 ISCUQ9H1K1 167 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 RETREG1Q9H6L5 497 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 PADI4Q9UM07 663 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 NENFQ9UMX5 172 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 SSUH2Q9Y2M2 353 aa23.45■■□□□ 1.34
SSNA1-203ENST00000463511 UNC13CQ8NB66 2214 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 J3QKU1 62 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 YY2O15391 372 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 BUB1O43683 1085 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 KDELR3O43731 214 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 PTPN9P43378 593 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 HDAC4P56524 1084 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 GSCP56915 257 aaPredicted RBP23.44■■□□□ 1.34
SSNA1-203ENST00000463511 ESRP1Q6NXG1 681 aaKnown RBP23.44■■□□□ 1.34
SSNA1-203ENST00000463511 STRADAQ7RTN6 431 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 TP53I13Q8NBR0 393 aaPredicted RBP23.44■■□□□ 1.34
SSNA1-203ENST00000463511 WDR48Q8TAF3 677 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 FAM172AQ8WUF8 416 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 PANX2Q96RD6 677 aa23.44■■□□□ 1.34
SSNA1-203ENST00000463511 TCRBV5S1A1TA0A578 114 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 ZSCAN5CA6NGD5 496 aaPredicted RBP23.43■■□□□ 1.34
SSNA1-203ENST00000463511 TNFSF15O95150 251 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 IGSF6O95976 241 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 PPARDQ03181 441 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 RAD51Q06609 339 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 IRF4Q15306 451 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 KIAA1614Q5VZ46 1190 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 KYQ8NBH2 561 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 KLC2Q9H0B6 622 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 NOL6Q9H6R4 1146 aaKnown RBP23.43■■□□□ 1.34
SSNA1-203ENST00000463511 NHEJ1Q9H9Q4 299 aaPredicted RBP23.43■■□□□ 1.34
SSNA1-203ENST00000463511 SIRPGQ9P1W8 387 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 GULP1Q9UBP9 304 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 DOLKQ9UPQ8 538 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 COQ6Q9Y2Z9 468 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 MYO18BQ8IUG5 2567 aa23.43■■□□□ 1.34
SSNA1-203ENST00000463511 CCDC187A0A096LP49 1063 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 K7ENP7 123 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 RHOAP61586 193 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 INO80CQ6PI98 192 aaPredicted RBP23.42■■□□□ 1.34
SSNA1-203ENST00000463511 CLEC14AQ86T13 490 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 HID1Q8IV36 788 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 PYROXD2Q8N2H3 581 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 PCDH19Q8TAB3 1148 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 CENPIQ92674 756 aaPredicted RBP23.42■■□□□ 1.34
SSNA1-203ENST00000463511 EXOC2Q96KP1 924 aa23.42■■□□□ 1.34
SSNA1-203ENST00000463511 TOR1BO14657 336 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 TIMP2P16035 220 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 FECHP22830 423 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 CLN3Q13286 438 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 SLC18A3Q16572 532 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 CCDC122Q5T0U0 273 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 ALKBH5Q6P6C2 394 aaKnown RBP23.41■■□□□ 1.34
SSNA1-203ENST00000463511 B3GNT8Q7Z7M8 397 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 ARL10Q8N8L6 244 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 C3orf20Q8ND61 904 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 TSACCQ96A04 125 aaPredicted RBP23.41■■□□□ 1.34
SSNA1-203ENST00000463511 NTAN1Q96AB6 310 aa23.41■■□□□ 1.34
SSNA1-203ENST00000463511 DKK3Q9UBP4 350 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms