RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PAPD7Q5XG87 772 aaKnown RBP7.64□□□□□ -1.19
UBE4B-204ENST00000462658 ARHGAP17Q68EM7 881 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 CD300LGQ6UXG3 332 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 MMS22LQ6ZRQ5 1243 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 HTR3DQ70Z44 454 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 MON1BQ7L1V2 547 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 PHLDB2Q86SQ0 1253 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 ERICH1Q86X53 443 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 METTL23Q86XA0 190 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 C1orf210Q8IVY1 113 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 COLGALT2Q8IYK4 626 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 SYCE1Q8N0S2 351 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM86AQ8N2M4 240 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM199Q8N511 208 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 ZFP28Q8NHY6 868 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 UBA3Q8TBC4 463 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 RGMAQ96B86 450 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 TNIP3Q96KP6 325 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 C11orf70Q9BRQ4 267 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 NDC1Q9BTX1 674 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 TUBB2BQ9BVA1 445 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 NUP85Q9BW27 656 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 DPEP3Q9H4B8 488 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 FBXO34Q9NWN3 711 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 UVRAGQ9P2Y5 699 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 HESX1Q9UBX0 185 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 CHORDC1Q9UHD1 332 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-204ENST00000462658 TSPAN16Q9UKR8 245 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 COG5Q9UP83 839 aa7.64□□□□□ -1.19
UBE4B-204ENST00000462658 SCN1AP35498 2009 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ABHD14A-ACY1A0A1B0GW23 586 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ARHGEF37A1IGU5 675 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM189-UBE2V1I3L0A0 370 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 I3L4J1 428 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 M0QZQ0 153 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 HCRTO43612 131 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 NCK2O43639 380 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 TADA2AO75478 443 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 MTA2O94776 668 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 FTCDO95954 541 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ALDH2P05091 517 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ODC1P11926 461 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 CSF2RAP15509 400 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 GPD2P43304 727 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 GATMP50440 423 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 CHN2P52757 468 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 CREMQ03060 361 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 NRN1LQ496H8 165 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 C2CD6Q53TS8 623 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 NAIF1Q69YI7 327 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 PEX26Q7Z412 305 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SPRED1Q7Z699 444 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SLFN11Q7Z7L1 901 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 DAAM2Q86T65 1068 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 TMPRSS6Q8IU80 811 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 WDR75Q8IWA0 830 aaKnown RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 TCEAL8Q8IYN2 117 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 MYO1HQ8N1T3 1032 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 LRRC57Q8N9N7 239 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 MSANTD4Q8NCY6 345 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF564Q8TBZ8 553 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SPATA18Q8TC71 538 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 HASPINQ8TF76 798 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 UBE2Q2Q8WVN8 375 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 RSPH1Q8WYR4 309 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 MRPL9Q9BYD2 267 aaKnown RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 NRDE2Q9H7Z3 1164 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 MRPL47Q9HD33 250 aaKnown RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 FAM49BQ9NUQ9 324 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 PARVAQ9NVD7 372 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 DDX43Q9NXZ2 648 aaKnown RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 DNAJB4Q9UDY4 337 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 CYTH4Q9UIA0 394 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 ZMYND8Q9ULU4 1186 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SORCS3Q9UPU3 1222 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 CLCA2Q9UQC9 943 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SAR1BQ9Y6B6 198 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 SCINQ9Y6U3 715 aa7.63□□□□□ -1.19
UBE4B-204ENST00000462658 PDCD11Q14690 1871 aaKnown RBP7.63□□□□□ -1.19
UBE4B-204ENST00000462658 DRGXA6NNA5 263 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM110-MUSTN1A8MSY1 372 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 F8W810 466 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 GRM6O15303 877 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TRAPPC3O43617 180 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 FAM20BO75063 409 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ATP2C2O75185 946 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ITGB1P05556 798 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CD1AP06126 327 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ADRB1P08588 477 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 SETSIPP0DME0 302 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CCDC130P13994 396 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PRLRP16471 622 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TYMPP19971 482 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 MALP21145 153 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ACAT1P24752 427 aaKnown RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ADORA2BP29275 332 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 GABRB2P47870 512 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PSMC1P62191 440 aaKnown RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 NHLH2Q02577 135 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms