RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KIF26BQ2KJY2 2108 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 FLNBO75369 2602 aaKnown RBP18.01■□□□□ 0.47
SSB-206ENST00000461708 J3KR12 359 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 MUSKO15146 869 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 PIGNO95427 931 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 GZMAP12544 262 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 ATP1A3P13637 1013 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 C6P13671 934 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 MMP12P39900 470 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 HCAR3P49019 387 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 NSUN2Q08J23 767 aaKnown RBP eCLIP18.01■□□□□ 0.47
SSB-206ENST00000461708 C1orf61Q13536 156 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 RFTN1Q14699 578 aaPredicted RBP18.01■□□□□ 0.47
SSB-206ENST00000461708 NFATC4Q14934 902 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 CFAP58Q5T655 872 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 BROXQ5VW32 411 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 ARL10Q8N8L6 244 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 NETO2Q8NC67 525 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 SLC39A7Q92504 469 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 ECHDC3Q96DC8 303 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 SLC46A1Q96NT5 459 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 NAT10Q9H0A0 1025 aaKnown RBP18.01■□□□□ 0.47
SSB-206ENST00000461708 ATP13A3Q9H7F0 1226 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 TAS2R14Q9NYV8 317 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 SSUH2Q9Y2M2 353 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 ENTPD2Q9Y5L3 495 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 LRP4O75096 1905 aa18.01■□□□□ 0.47
SSB-206ENST00000461708 TMEM191CA6NGB0 347 aa18■□□□□ 0.47
SSB-206ENST00000461708 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
SSB-206ENST00000461708 BUB1BO60566 1050 aaPredicted RBP18■□□□□ 0.47
SSB-206ENST00000461708 RASGRP1O95267 797 aa18■□□□□ 0.47
SSB-206ENST00000461708 MBD3O95983 291 aa18■□□□□ 0.47
SSB-206ENST00000461708 PSMA2P25787 234 aa18■□□□□ 0.47
SSB-206ENST00000461708 RBMS1P29558 406 aaKnown RBP18■□□□□ 0.47
SSB-206ENST00000461708 SERPINA4P29622 427 aa18■□□□□ 0.47
SSB-206ENST00000461708 LIG3P49916 1009 aa18■□□□□ 0.47
SSB-206ENST00000461708 PAPOLAP51003 745 aaKnown RBP18■□□□□ 0.47
SSB-206ENST00000461708 TMPRSS3P57727 454 aa18■□□□□ 0.47
SSB-206ENST00000461708 SKOR1P84550 965 aa18■□□□□ 0.47
SSB-206ENST00000461708 MTM1Q13496 603 aa18■□□□□ 0.47
SSB-206ENST00000461708 ALG11Q2TAA5 492 aa18■□□□□ 0.47
SSB-206ENST00000461708 PERM1Q5SV97 790 aa18■□□□□ 0.47
SSB-206ENST00000461708 CCDC183Q5T5S1 534 aa18■□□□□ 0.47
SSB-206ENST00000461708 RFX8Q6ZV50 586 aa18■□□□□ 0.47
SSB-206ENST00000461708 SRLQ86TD4 932 aa18■□□□□ 0.47
SSB-206ENST00000461708 ARFGAP1Q8N6T3 406 aa18■□□□□ 0.47
SSB-206ENST00000461708 OR6C4Q8NGE1 309 aa18■□□□□ 0.47
SSB-206ENST00000461708 ATXN7L3BQ96GX2 97 aa18■□□□□ 0.47
SSB-206ENST00000461708 APOOQ9BUR5 198 aa18■□□□□ 0.47
SSB-206ENST00000461708 EDEM3Q9BZQ6 932 aa18■□□□□ 0.47
SSB-206ENST00000461708 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
SSB-206ENST00000461708 DHX35Q9H5Z1 703 aaKnown RBP18■□□□□ 0.47
SSB-206ENST00000461708 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
SSB-206ENST00000461708 SATB2Q9UPW6 733 aa18■□□□□ 0.47
SSB-206ENST00000461708 DGKBQ9Y6T7 804 aa18■□□□□ 0.47
SSB-206ENST00000461708 ANKRD36A6QL64 1941 aa18■□□□□ 0.47
SSB-206ENST00000461708 A0A1W2PNU3 283 aaPredicted RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 NTN3O00634 580 aaPredicted RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 PALMO75781 387 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 RNF8O76064 485 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 HOXC4P09017 264 aaPredicted RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 POLR2LP62875 67 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 IL10RBQ08334 325 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 C19orf57Q0VDD7 668 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 INPP5AQ14642 412 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 LZTR1Q8N653 840 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 TSEN2Q8NCE0 465 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 WDR36Q8NI36 951 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 SNRNP27Q8WVK2 155 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 KCNE4Q8WWG9 221 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 CCDC97Q96F63 343 aaPredicted RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 CELF6Q96J87 481 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 CCDC3Q9BQI4 270 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 BPIFA3Q9BQP9 254 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 SNRNP25Q9BV90 132 aaKnown RBP17.99■□□□□ 0.47
SSB-206ENST00000461708 GPATCH2LQ9NWQ4 482 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 AIPL1Q9NZN9 384 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 DOLKQ9UPQ8 538 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 PIEZO2Q9H5I5 2752 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 UNC13CQ8NB66 2214 aa17.99■□□□□ 0.47
SSB-206ENST00000461708 TMX2-CTNND1H3BSU7 103 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 DAPK3O43293 454 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 PRPSAP2O60256 369 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 CTSEP14091 401 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 ERCC2P18074 760 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 PRKCIP41743 596 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 SRP54P61011 504 aaKnown RBP17.98■□□□□ 0.47
SSB-206ENST00000461708 AP1S1P61966 158 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 TYRO3Q06418 890 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 SPIDRQ14159 915 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 CA9Q16790 459 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 C3orf38Q5JPI3 329 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 TMCO4Q5TGY1 634 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 CYP4V2Q6ZWL3 525 aaPredicted RBP17.98■□□□□ 0.47
SSB-206ENST00000461708 ZSWIM9Q86XI8 627 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 GKN2Q86XP6 184 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 HID1Q8IV36 788 aa17.98■□□□□ 0.47
SSB-206ENST00000461708 ARHGAP12Q8IWW6 846 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms