RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 TAB1Q15750 504 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 NEPROQ6NW34 567 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 ZNF248Q8NDW4 579 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 FAM45AQ8TCE6 357 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 ALG3Q92685 438 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 DPY30Q9C005 99 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 CERS4Q9HA82 394 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 VPS45Q9NRW7 570 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 TRMT13Q9NUP7 481 aaKnown RBP10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 BTBD3Q9Y2F9 522 aa10.79□□□□□ -0.68
AMBRA1-202ENST00000458649 PHGDHO43175 533 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 EPHX1P07099 455 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ABCB1P08183 1280 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CNPP09543 421 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 PSMA4P25789 261 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 DGUOKQ16854 277 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CHST9Q7L1S5 443 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 APTXQ7Z2E3 356 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 MILR1Q7Z6M3 343 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SEMA3CQ99985 751 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ELOVL2Q9NXB9 296 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 VTI1BQ9UEU0 232 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 MYRFQ9Y2G1 1151 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ARL5CA6NH57 179 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 PER2O15055 1255 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SPATA31D3P0C874 917 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 COX7A2P14406 83 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CORO1AP31146 461 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CD86P42081 329 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CDK7P50613 346 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ACSM2AQ08AH3 577 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 DPYSL3Q14195 570 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 PGS1Q32NB8 556 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SPANXN2Q5MJ10 180 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 VARS2Q5ST30 1063 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ACSM2BQ68CK6 577 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 TTC27Q6P3X3 843 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SPATA31D4Q6ZUB0 917 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 GPSM1Q86YR5 675 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 C12orf50Q8NA57 414 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 VPS33AQ96AX1 596 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SPRTNQ9H040 489 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 TRIT1Q9H3H1 467 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 EXO5Q9H790 373 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 RGS14O43566 566 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CNOT3O75175 753 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ACRP10323 421 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 RBL1P28749 1068 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 MTHFRP42898 656 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 IFI35P80217 286 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CAP1Q01518 475 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 GSTA3Q16772 222 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 BHLHB9Q6PI77 547 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ENKURQ8TC29 256 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 COPS8Q99627 209 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 NTPCRQ9BSD7 190 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 EFCAB1Q9HAE3 211 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 NDRG2Q9UN36 371 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 AREL1O15033 823 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 LIASO43766 372 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 TRIM13O60858 407 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 C4BPAP04003 597 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CLCN5P51795 746 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 CCNHP51946 323 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 BNC1Q01954 994 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SPIRE1Q08AE8 756 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ILF3Q12906 894 aaKnown RBP eCLIP10.78□□□□□ -0.688e-7■■■□□ 17.4
AMBRA1-202ENST00000458649 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 ZBTB49Q6ZSB9 765 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 IKBIPQ70UQ0 350 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 BNIPLQ7Z465 357 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 BTN2A2Q8WVV5 523 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 VMP1Q96GC9 406 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 MYO19Q96H55 970 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SNX27Q96L92 541 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 TMEM79Q9BSE2 394 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 SNX13Q9Y5W8 968 aa10.78□□□□□ -0.68
AMBRA1-202ENST00000458649 MATN2O00339 956 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 BTN3A1O00481 513 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 CHADO15335 359 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 PRLP01236 227 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 ZSCAN5DPP0CG00 497 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 IMPDH2P12268 514 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 MGAT1P26572 445 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 JAM2P57087 298 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 ALDH6A1Q02252 535 aaKnown RBP10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 STXBP5Q5T5C0 1151 aa10.77□□□□□ -0.68
AMBRA1-202ENST00000458649 ECHDC2Q86YB7 292 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms