RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 LDB1Q86U70 411 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 TSPAN33Q86UF1 283 aa8.8□□□□□ -1
RIF1-208ENST00000457745 EXOC3L1Q86VI1 746 aa8.8□□□□□ -1
RIF1-208ENST00000457745 PALM2Q8IXS6 379 aa8.8□□□□□ -1
RIF1-208ENST00000457745 TTC30BQ8N4P2 665 aa8.8□□□□□ -1
RIF1-208ENST00000457745 PPM1NQ8N819 430 aa8.8□□□□□ -1
RIF1-208ENST00000457745 DNAAF3Q8N9W5 541 aa8.8□□□□□ -1
RIF1-208ENST00000457745 OR2A12Q8NGT7 310 aa8.8□□□□□ -1
RIF1-208ENST00000457745 GSDMBQ8TAX9 411 aa8.8□□□□□ -1
RIF1-208ENST00000457745 SLC44A1Q8WWI5 657 aa8.8□□□□□ -1
RIF1-208ENST00000457745 ELSPBP1Q96BH3 223 aa8.8□□□□□ -1
RIF1-208ENST00000457745 SERAC1Q96JX3 654 aa8.8□□□□□ -1
RIF1-208ENST00000457745 DNAJC1Q96KC8 554 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 ATP6V1G3Q96LB4 118 aa8.8□□□□□ -1
RIF1-208ENST00000457745 MCMBPQ9BTE3 642 aa8.8□□□□□ -1
RIF1-208ENST00000457745 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 CENPHQ9H3R5 247 aa8.8□□□□□ -1
RIF1-208ENST00000457745 SUDS3Q9H7L9 328 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 UBE2ZQ9H832 354 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 MARCH4Q9P2E8 410 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 EPS15L1Q9UBC2 864 aa8.8□□□□□ -1
RIF1-208ENST00000457745 AAR2Q9Y312 384 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 ARL5AQ9Y689 179 aa8.8□□□□□ -1
RIF1-208ENST00000457745 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
RIF1-208ENST00000457745 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
RIF1-208ENST00000457745 FAM237BA0A1B0GVD1 139 aa8.79□□□□□ -1
RIF1-208ENST00000457745 MROH6A6NGR9 719 aa8.79□□□□□ -1
RIF1-208ENST00000457745 GAPDHSO14556 408 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 SLC9A3R1O14745 358 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 HTRA2O43464 458 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 NEBLO76041 1014 aa8.79□□□□□ -1
RIF1-208ENST00000457745 PGLSO95336 258 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NFATC1O95644 943 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NDST3O95803 873 aa8.79□□□□□ -1
RIF1-208ENST00000457745 ADH1CP00326 375 aa8.79□□□□□ -1
RIF1-208ENST00000457745 TSHRP16473 764 aa8.79□□□□□ -1
RIF1-208ENST00000457745 PSMC3P17980 439 aa8.79□□□□□ -1
RIF1-208ENST00000457745 LHCGRP22888 699 aa8.79□□□□□ -1
RIF1-208ENST00000457745 ABL2P42684 1182 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NPY2RP49146 381 aa8.79□□□□□ -1
RIF1-208ENST00000457745 CCNHP51946 323 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 ZNF140P52738 457 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 MAGOHP61326 146 aaKnown RBP8.79□□□□□ -1
RIF1-208ENST00000457745 CBX1P83916 185 aa8.79□□□□□ -1
RIF1-208ENST00000457745 ECT2LQ008S8 904 aa8.79□□□□□ -1
RIF1-208ENST00000457745 TFF2Q03403 129 aa8.79□□□□□ -1
RIF1-208ENST00000457745 IFFO1Q0D2I5 559 aa8.79□□□□□ -1
RIF1-208ENST00000457745 PDGFRLQ15198 375 aa8.79□□□□□ -1
RIF1-208ENST00000457745 CNGA3Q16281 694 aa8.79□□□□□ -1
RIF1-208ENST00000457745 POM121L1PQ3SYA9 428 aa8.79□□□□□ -1
RIF1-208ENST00000457745 C2orf27AQ580R0 203 aa8.79□□□□□ -1
RIF1-208ENST00000457745 TSTD2Q5T7W7 516 aa8.79□□□□□ -1
RIF1-208ENST00000457745 AGBL2Q5U5Z8 902 aa8.79□□□□□ -1
RIF1-208ENST00000457745 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
RIF1-208ENST00000457745 GRAMD4Q6IC98 578 aa8.79□□□□□ -1
RIF1-208ENST00000457745 CES5AQ6NT32 575 aa8.79□□□□□ -1
RIF1-208ENST00000457745 SH2D5Q6ZV89 423 aa8.79□□□□□ -1
RIF1-208ENST00000457745 DENND6AQ8IWF6 608 aa8.79□□□□□ -1
RIF1-208ENST00000457745 KRT222Q8N1A0 295 aa8.79□□□□□ -1
RIF1-208ENST00000457745 OR2AP1Q8NGE2 309 aa8.79□□□□□ -1
RIF1-208ENST00000457745 MDM1Q8TC05 714 aa8.79□□□□□ -1
RIF1-208ENST00000457745 BLOC1S5Q8TDH9 187 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NAT14Q8WUY8 206 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NSMCE1Q8WV22 266 aa8.79□□□□□ -1
RIF1-208ENST00000457745 PTPRN2Q92932 1015 aa8.79□□□□□ -1
RIF1-208ENST00000457745 FUBP1Q96AE4 644 aaKnown RBP8.79□□□□□ -1
RIF1-208ENST00000457745 ACDQ96AP0 544 aa8.79□□□□□ -1
RIF1-208ENST00000457745 LRRC39Q96DD0 335 aa8.79□□□□□ -1
RIF1-208ENST00000457745 CERS2Q96G23 380 aa8.79□□□□□ -1
RIF1-208ENST00000457745 RIPOR3Q96MK2 946 aa8.79□□□□□ -1
RIF1-208ENST00000457745 TTC25Q96NG3 672 aa8.79□□□□□ -1
RIF1-208ENST00000457745 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
RIF1-208ENST00000457745 FRMD8Q9BZ67 464 aaPredicted RBP8.79□□□□□ -1
RIF1-208ENST00000457745 CIPCQ9C0C6 399 aa8.79□□□□□ -1
RIF1-208ENST00000457745 DONSONQ9NYP3 566 aa8.79□□□□□ -1
RIF1-208ENST00000457745 BFARQ9NZS9 450 aa8.79□□□□□ -1
RIF1-208ENST00000457745 OGFRQ9NZT2 677 aa8.79□□□□□ -1
RIF1-208ENST00000457745 VPS18Q9P253 973 aa8.79□□□□□ -1
RIF1-208ENST00000457745 BCCIPQ9P287 314 aaKnown RBP eCLIP8.79□□□□□ -1
RIF1-208ENST00000457745 PRKAG3Q9UGI9 489 aa8.79□□□□□ -1
RIF1-208ENST00000457745 ZMYM5Q9UJ78 669 aa8.79□□□□□ -1
RIF1-208ENST00000457745 TSR3Q9UJK0 312 aaKnown RBP8.79□□□□□ -1
RIF1-208ENST00000457745 SARDHQ9UL12 918 aa8.79□□□□□ -1
RIF1-208ENST00000457745 SLC27A6Q9Y2P4 619 aa8.79□□□□□ -1
RIF1-208ENST00000457745 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
RIF1-208ENST00000457745 CKAP5Q14008 2032 aa8.79□□□□□ -1
RIF1-208ENST00000457745 NPIPB15A6NHN6 443 aaPredicted RBP8.78□□□□□ -1
RIF1-208ENST00000457745 A8MX80 341 aa8.78□□□□□ -1
RIF1-208ENST00000457745 PSMD3O43242 534 aa8.78□□□□□ -1
RIF1-208ENST00000457745 ECI2O75521 394 aa8.78□□□□□ -1
RIF1-208ENST00000457745 USP1O94782 785 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SLC4A1P02730 911 aa8.78□□□□□ -1
RIF1-208ENST00000457745 UGT2B4P06133 528 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SERPINF2P08697 491 aa8.78□□□□□ -1
RIF1-208ENST00000457745 IL9P15248 144 aa8.78□□□□□ -1
RIF1-208ENST00000457745 IL12RB1P42701 662 aa8.78□□□□□ -1
RIF1-208ENST00000457745 WASP42768 502 aa8.78□□□□□ -1
RIF1-208ENST00000457745 CDKN1CP49918 316 aaPredicted RBP8.78□□□□□ -1
RIF1-208ENST00000457745 ATP1A2P50993 1020 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SLC12A1Q13621 1099 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms