RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 LZTS3O60299 673 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 MT-CYBP00156 380 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 EGFP01133 1207 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CAPNS1P04632 268 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ERGP11308 486 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CTHP32929 405 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 MAGEA4P43358 317 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 STK19P49842 368 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 MAGOHP61326 146 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 TFDP2Q14188 446 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 EFTUD2Q15029 972 aaKnown RBP eCLIP4.99□□□□□ -1.613e-6■■■□□ 18.5
RIF1-207ENST00000454583 PDK1Q15118 436 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TSTD2Q5T7W7 516 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TEDDM1Q5T9Z0 273 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 IZUMO3Q5VZ72 239 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 C22orf39Q6P5X5 142 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ELMSAN1Q6PJG2 1045 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 UNC5AQ6ZN44 842 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 DPPA4Q7L190 304 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 LRRC56Q8IYG6 542 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 TERB1Q8NA31 727 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 C10orf82Q8WW14 230 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ING5Q8WYH8 240 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 LRRC39Q96DD0 335 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 LENG8Q96PV6 779 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 VPS35Q96QK1 796 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 KDM4CQ9H3R0 1056 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SERGEFQ9UGK8 458 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 BDP1A6H8Y1 2624 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 A6NCN8 305 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 PRRG1O14668 218 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SNX3O60493 162 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TBL1XO60907 577 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 DNAJC6O75061 913 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 DNAJC8O75937 253 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 RNF8O76064 485 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CHN1P15882 459 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TIMP2P16035 220 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 FDFT1P37268 417 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 LEPRP48357 1165 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 PLTPP55058 493 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TPI1P60174 286 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 DSC2Q02487 901 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CTSL3PQ5NE16 218 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CFAP58Q5T655 872 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 KCTD16Q68DU8 428 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CYP2U1Q7Z449 544 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CDKL3Q8IVW4 592 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 ARHGEF39Q8N4T4 335 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CCDC89Q8N998 374 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 C2CD4AQ8NCU7 369 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 GIMAP7Q8NHV1 300 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 IFT81Q8WYA0 676 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SERAC1Q96JX3 654 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 UBXN10Q96LJ8 280 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ACOX2Q99424 681 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TSPYL1Q9H0U9 437 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ATXN3LQ9H3M9 355 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 MAGEE1Q9HCI5 957 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 GTSE1Q9NYZ3 720 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 IL17CQ9P0M4 197 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SIRPGQ9P1W8 387 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 FEZ2Q9UHY8 353 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 MTUS1Q9ULD2 1270 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 TTC34A8MYJ7 566 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ARHGAP33O14559 1287 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 MCF2LO15068 1137 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 POLR3GO15318 223 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 GIMD1P0DJR0 217 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ABL2P42684 1182 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CHRNA4P43681 627 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 GALK1P51570 392 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ARSDP51689 593 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SEC24CP53992 1094 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 STAT4Q14765 748 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 EIF4HQ15056 248 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 PPP1R3AQ16821 1122 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 HNRNPA1L2Q32P51 320 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 CEP85LQ5SZL2 805 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ZNF697Q5TEC3 545 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 C1orf228Q6PIY5 440 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CDHR3Q6ZTQ4 885 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ERN2Q76MJ5 926 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 TAX1BP1Q86VP1 789 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 C17orf82Q86X59 251 aaPredicted RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 CHST14Q8NCH0 376 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 BBOF1Q8ND07 529 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 MDM1Q8TC05 714 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 CELF6Q96J87 481 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 ZFYVE19Q96K21 471 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 ASB2Q96Q27 587 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 HHIPQ96QV1 700 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 EBNA1BP2Q99848 306 aaKnown RBP4.99□□□□□ -1.61
RIF1-207ENST00000454583 C20orf27Q9GZN8 174 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SYNCQ9H7C4 482 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 PAK5Q9P286 719 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 IPO11Q9UI26 975 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms