RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RD3Q7Z3Z2 195 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 BBS5Q8N3I7 341 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 PGBD5Q8N414 524 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 KCTD6Q8NC69 237 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 DENND6BQ8NEG7 585 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 OR4C6Q8NH72 309 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 CCDC42Q96M95 316 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 ZNF641Q96N77 438 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 LENG8Q96PV6 779 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 TUBGCP5Q96RT8 1024 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 TRIM5Q9C035 493 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 SUDS3Q9H7L9 328 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 NHEJ1Q9H9Q4 299 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 UVRAGQ9P2Y5 699 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 PNMA8BQ9ULN7 279 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 OR1A2Q9Y585 309 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 ARID1BQ8NFD5 2236 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 COL27A1Q8IZC6 1860 aaPredicted RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 SSU72P8A0A1W2PR75 194 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 TSPAN11A1L157 253 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 GOLGA6CA6NDK9 693 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 TMEM8BA6NDV4 472 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 AKR1B15C9JRZ8 316 aaPredicted RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 AQP9O43315 295 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 MAFKO60675 156 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 DKK1O94907 266 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CSF2P04141 144 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 TMEM253P0C7T8 217 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 GOLGA6DP0CG33 693 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 NME1P15531 152 aaKnown RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 CTPS1P17812 591 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 HNF1BP35680 557 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PFN3P60673 137 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 AP1S1P61966 158 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 TRAF2Q12933 501 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 EIF2B5Q13144 721 aaKnown RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 PTK2BQ14289 1009 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ACOX1Q15067 660 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PTPRRQ15256 657 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ASTE1Q2TB18 679 aaPredicted RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 WSCD2Q2TBF2 565 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ANKRD20A8PQ5CZ79 823 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PRRT3Q5FWE3 981 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 FAXCQ5TGI0 409 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 MARC1Q5VT66 337 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CRTC1Q6UUV9 634 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ENPP7Q6UWV6 458 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ZSCAN30Q86W11 494 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 HID1Q8IV36 788 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PHACTR4Q8IZ21 702 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PLA2G15Q8NCC3 412 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PCDH19Q8TAB3 1148 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 FAM174AQ8TBP5 190 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 TSC1Q92574 1164 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CENPTQ96BT3 561 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 APOLD1Q96LR9 279 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 ZNF599Q96NL3 588 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 PSKH2Q96QS6 385 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CCDC86Q9H6F5 360 aaKnown RBP9.74□□□□□ -0.85
USP54-207ENST00000451492 SYNDIG1Q9H7V2 258 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 NOD2Q9HC29 1040 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 GOLGA6AQ9NYA3 693 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 NLGN3Q9NZ94 848 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 B4GALT6Q9UBX8 382 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 MOSPD1Q9UJG1 213 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 HYOU1Q9Y4L1 999 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
USP54-207ENST00000451492 TPRP12270 2363 aaKnown RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 A0A0U1RQS6 177 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 FAM221BA6H8Z2 402 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 SRRM3A6NNA2 597 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 K7ESM1 405 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 TRAFD1O14545 582 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 PEX11BO96011 259 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 KRT1P04264 644 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 GIMD1P0DJR0 217 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 JUPP14923 745 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 IL4RP24394 825 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 CSNK1DP48730 415 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ARSEP51690 589 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 DYNLT1P63172 113 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 GBE1Q04446 702 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 RALGDSQ12967 914 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 INPP5AQ14642 412 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 SMAD1Q15797 465 aaKnown RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 CDKN3Q16667 212 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ODF2Q5BJF6 829 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 MACC1Q6ZN28 852 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms