RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RD3Q7Z3Z2 195 aa27.34■■□□□ 1.97
USP42-204ENST00000451154 HID1Q8IV36 788 aa27.34■■□□□ 1.97
USP42-204ENST00000451154 ATXN7L3BQ96GX2 97 aa27.34■■□□□ 1.97
USP42-204ENST00000451154 APOOQ9BUR5 198 aa27.34■■□□□ 1.97
USP42-204ENST00000451154 HAUS4Q9H6D7 363 aa27.34■■□□□ 1.97
USP42-204ENST00000451154 ANKRD36A6QL64 1941 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 GCN1Q92616 2671 aaKnown RBP27.33■■□□□ 1.97
USP42-204ENST00000451154 TMEM110-MUSTN1A8MSY1 372 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 LZTS3O60299 673 aaPredicted RBP27.33■■□□□ 1.97
USP42-204ENST00000451154 MBD3O95983 291 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 ERCC2P18074 760 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 MIPP30301 263 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 PPP6R3Q5H9R7 873 aaPredicted RBP27.33■■□□□ 1.97
USP42-204ENST00000451154 AFMIDQ63HM1 303 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 BRAT1Q6PJG6 821 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 ENPP7Q6UWV6 458 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 ARHGAP36Q6ZRI8 547 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 RFX8Q6ZV50 586 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 ARHGAP12Q8IWW6 846 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 ZNF248Q8NDW4 579 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 TPCN2Q8NHX9 752 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 HIC2Q96JB3 615 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 TUBGCP5Q96RT8 1024 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 NAT10Q9H0A0 1025 aaKnown RBP27.33■■□□□ 1.97
USP42-204ENST00000451154 TMEM63CQ9P1W3 806 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 GULP1Q9UBP9 304 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 PADI4Q9UM07 663 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 DOLKQ9UPQ8 538 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 SATB2Q9UPW6 733 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 OR1A2Q9Y585 309 aa27.33■■□□□ 1.97
USP42-204ENST00000451154 COL27A1Q8IZC6 1860 aaPredicted RBP27.32■■□□□ 1.96
USP42-204ENST00000451154 A0A1W2PNU3 283 aaPredicted RBP27.32■■□□□ 1.96
USP42-204ENST00000451154 DFFAO00273 331 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 RNF8O76064 485 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 DXOO77932 396 aaKnown RBP27.32■■□□□ 1.96
USP42-204ENST00000451154 CSNK1DP48730 415 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 HK3P52790 923 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 PCBP4P57723 403 aaKnown RBP27.32■■□□□ 1.96
USP42-204ENST00000451154 ALG11Q2TAA5 492 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 C3orf38Q5JPI3 329 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 RBM44Q6ZP01 1051 aaKnown RBP27.32■■□□□ 1.96
USP42-204ENST00000451154 ATP13A3Q9H7F0 1226 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 ATP8A1Q9Y2Q0 1164 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 ENTPD2Q9Y5L3 495 aa27.32■■□□□ 1.96
USP42-204ENST00000451154 EIF3CLB5ME19 914 aaKnown RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 PRPSAP2O60256 369 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 PRB1P04280 392 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 PCCBP05166 539 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 CTSEP14091 401 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 MMP12P39900 470 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 BLKP51451 505 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 NFATC4Q14934 902 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 E4F1Q66K89 784 aaPredicted RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 ESRP1Q6NXG1 681 aaKnown RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 CYP4V2Q6ZWL3 525 aaPredicted RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 TP53INP2Q8IXH6 220 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 NPWQ8N729 165 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 EIF3CQ99613 913 aaKnown RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 ASCL3Q9NQ33 180 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 AIPL1Q9NZN9 384 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 SIRPGQ9P1W8 387 aa27.31■■□□□ 1.96
USP42-204ENST00000451154 CNOT8Q9UFF9 292 aaKnown RBP27.31■■□□□ 1.96
USP42-204ENST00000451154 DDX3XO00571 662 aaKnown RBP eCLIP27.3■■□□□ 1.969e-7■■■□□ 18.6
USP42-204ENST00000451154 HTR1BP28222 390 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 ERVPABLB-1P60509 514 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 SRP54P61011 504 aaKnown RBP27.3■■□□□ 1.96
USP42-204ENST00000451154 CXADRP78310 365 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 ELOCQ15369 112 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 GPR155Q7Z3F1 870 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 FSTL5Q8N475 847 aaPredicted RBP27.3■■□□□ 1.96
USP42-204ENST00000451154 PLA2G15Q8NCC3 412 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 SCG3Q8WXD2 468 aaKnown RBP27.3■■□□□ 1.96
USP42-204ENST00000451154 NAT6Q93015 286 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 CCDC3Q9BQI4 270 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 CINPQ9BW66 212 aaPredicted RBP27.3■■□□□ 1.96
USP42-204ENST00000451154 EDEM3Q9BZQ6 932 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 SP110Q9HB58 689 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 CWC15Q9P013 229 aaKnown RBP27.3■■□□□ 1.96
USP42-204ENST00000451154 ATMQ13315 3056 aa27.3■■□□□ 1.96
USP42-204ENST00000451154 SMTNL1A8MU46 457 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 RASGRP1O95267 797 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 GZMAP12544 262 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 SKILP12757 684 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 SERPINA4P29622 427 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 AGERQ15109 404 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 FILIP1LQ4L180 1135 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 KCTD16Q68DU8 428 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 PCDH19Q8TAB3 1148 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 FNIP1Q8TF40 1166 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 SLC39A7Q92504 469 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 NSMCE3Q96MG7 304 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 NAP1L5Q96NT1 182 aaPredicted RBP27.29■■□□□ 1.96
USP42-204ENST00000451154 BPIFA3Q9BQP9 254 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 SYNDIG1Q9H7V2 258 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 MYO1AQ9UBC5 1043 aa27.29■■□□□ 1.96
USP42-204ENST00000451154 A8MX80 341 aa27.28■■□□□ 1.96
USP42-204ENST00000451154 TCEA3O75764 348 aa27.28■■□□□ 1.96
USP42-204ENST00000451154 ALPIP09923 528 aa27.28■■□□□ 1.96
USP42-204ENST00000451154 RBMS1P29558 406 aaKnown RBP27.28■■□□□ 1.96
USP42-204ENST00000451154 SCNN1BP51168 640 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms