RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 YWHAEP62258 255 aaKnown RBP12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 INPP5AQ14642 412 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 NR1D2Q14995 579 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 NR6A1Q15406 480 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 CNGA2Q16280 664 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 TMEM135Q86UB9 458 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 RYBPQ8N488 228 aaPredicted RBP12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 FBXL13Q8NEE6 735 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 BLZF1Q9H2G9 400 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 FBXO8Q9NRD0 319 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 RRN3Q9NYV6 651 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 RCOR1Q9UKL0 485 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 CHD5Q8TDI0 1954 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 SPG11Q96JI7 2443 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 A0A0D9SEW6 157 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 PIPSLA2A3N6 862 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 M0QYV0 167 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 CASP1P29466 404 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 GTF2H1P32780 548 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 DPYDQ12882 1025 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 ELOAQ14241 798 aaKnown RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 MAP7Q14244 749 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 KCTD16Q68DU8 428 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 TMEM71Q6P5X7 295 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 FOXR2Q6PJQ5 311 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 C17orf82Q86X59 251 aaPredicted RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 OR1E3Q8WZA6 343 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 PDXPQ96GD0 296 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 LURAP1Q96LR2 239 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 SPATS2LQ9NUQ6 558 aaKnown RBP12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
AC004540.1-204ENST00000449537 A6NCN8 305 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 ANKUB1A6NFN9 424 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 CUTAO60888 179 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 ADCY5O95622 1261 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 DLGAP3O95886 979 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 RECKO95980 971 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 GKP32189 559 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 SERPINH1P50454 418 aaKnown RBP12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 YWHAZP63104 245 aaKnown RBP12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 PITX1P78337 314 aaPredicted RBP12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 ENPEPQ07075 957 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 STK4Q13043 487 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 MTA1Q13330 715 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 CUL2Q13617 745 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 C5orf22Q49AR2 442 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 FAM173BQ6P4H8 233 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 CCL4L1Q8NHW4 92 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 KLHL32Q96NJ5 620 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 WRAP53Q9BUR4 548 aaKnown RBP12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 SIK2Q9H0K1 926 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 FAM204AQ9H8W3 233 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 POPDC2Q9HBU9 364 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 MLXIPLQ9NP71 852 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 FAM13BQ9NYF5 915 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 PCDHGA9Q9Y5G4 932 aaKnown RBP12.67□□□□□ -0.38
AC004540.1-204ENST00000449537 LRP4O75096 1905 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 A8MU76 341 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 KRT86O43790 486 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 CALUO43852 315 aaPredicted RBP12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 DPM1O60762 260 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 CREG1O75629 220 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 FGF1P05230 155 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 GGCXP38435 758 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 ME1P48163 572 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 CDK17Q00537 523 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 ALFQ53S48 1182 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 LRRC73Q5JTD7 316 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 LYSMD3Q7Z3D4 306 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 XYLT1Q86Y38 959 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 FAM186BQ8IYM0 893 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 Q8NA96 180 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 OR56A4Q8NGH8 313 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 OR6K2Q8NGY2 324 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 ZDHHC1Q8WTX9 485 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms