RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 FOXC1Q12948 553 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 SUZ12Q15022 739 aaKnown RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 SHBQ15464 509 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 TRIP6Q15654 476 aaKnown RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 TIGD7Q6NT04 549 aaPredicted RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 KIAA1328Q86T90 577 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 LRRC49Q8IUZ0 686 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 TMEM139Q8IV31 216 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 SLC22A18ASQ8N1D0 253 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 OXR1Q8N573 874 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 CCNYQ8ND76 341 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 DENND6BQ8NEG7 585 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 RHBDD1Q8TEB9 315 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 ECHDC3Q96DC8 303 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 C1QTNF7Q9BXJ2 289 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 ERVMER34-1Q9H9K5 563 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 NOD2Q9HC29 1040 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 IMPACTQ9P2X3 320 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 SALL4Q9UJQ4 1053 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 PCDHGC4Q9Y5F7 938 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 ALG6Q9Y672 507 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
LSP1P3-201ENST00000449530 TDRD6O60522 2096 aaKnown RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 MATN3O15232 486 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 CBFA2T3O75081 653 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SOCS5O75159 536 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 HLA-DQB2P05538 268 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 ITGAVP06756 1048 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 C6P13671 934 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 GRK6P43250 576 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 LIG3P49916 1009 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 VAV2P52735 878 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 NAP1L1P55209 391 aaKnown RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SHC2P98077 582 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 ITKQ08881 620 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SLC10A2Q12908 348 aaPredicted RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 RALGDSQ12967 914 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 IRF4Q15306 451 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 LLGL1Q15334 1064 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 MFSD7Q6UXD7 560 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 NPNTQ6UXI9 565 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 Q6ZSR6 202 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 DAAM2Q86T65 1068 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 CCDC13Q8IYE1 715 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 TEX26Q8N6G2 289 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 BAHD1Q8TBE0 780 aaPredicted RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SAP25Q8TEE9 199 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 MAML1Q92585 1016 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 HDAC11Q96DB2 347 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 BMFQ96LC9 184 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SEMA3CQ99985 751 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 DESI2Q9BSY9 194 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 POLR1EQ9GZS1 481 aaKnown RBP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 RBM22Q9NW64 420 aaKnown RBP eCLIP12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 HS3ST3A1Q9Y663 406 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 SPEGQ15772 3267 aa12.01□□□□□ -0.49
LSP1P3-201ENST00000449530 ZZEF1O43149 2961 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 LRP4O75096 1905 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 A8MX80 341 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 KCNK1O00180 336 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 HTRA2O43464 458 aaPredicted RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 LZTS3O60299 673 aaPredicted RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 ELFN1P0C7U0 828 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 FTH1P19P0C7X4 201 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 KRT10P13645 584 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 CCNB1P14635 433 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 CCNCP24863 283 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 CDKN2BP42772 138 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 RABIFP47224 123 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 DSC2Q02487 901 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 RALGPS1Q5JS13 557 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 TPRG1LQ5T0D9 272 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 KAZNQ674X7 775 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 SPOCD1Q6ZMY3 1216 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 DPPA4Q7L190 304 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 KATNAL2Q8IYT4 538 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 TP53I13Q8NBR0 393 aaPredicted RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 ASB12Q8WXK4 309 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 KRT35Q92764 455 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 TSGA13Q96PP4 275 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 LENG8Q96PV6 779 aaPredicted RBP12□□□□□ -0.49
LSP1P3-201ENST00000449530 LGMNQ99538 433 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 LACRTQ9GZZ8 138 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 CAAP1Q9H8G2 361 aa12□□□□□ -0.49
LSP1P3-201ENST00000449530 MBNL1Q9NR56 388 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms