RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 STX7O15400 261 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 PIAS1O75925 651 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PIGNO95427 931 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PIRTP0C851 137 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 KCNA5P22460 613 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SP100P23497 879 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 SPRP35270 261 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 ABL2P42684 1182 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SLC6A11P48066 632 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 POLR2LP62875 67 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 TMPRSS15P98073 1019 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 ILF2Q12905 390 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 DNAJC3Q13217 504 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SMAD4Q13485 552 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 TAF1AQ15573 450 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 CCDC85BQ15834 202 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 QPCTQ16769 361 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 NEPROQ6NW34 567 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PACS1Q6VY07 963 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 Q6ZVU0 165 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 USP45Q70EL2 814 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SDCCAG8Q86SQ7 713 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 TAX1BP1Q86VP1 789 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 C12orf40Q86WS4 652 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 CAMK1DQ8IU85 385 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 ETFBKMTQ8IXQ9 262 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SORCS1Q8WY21 1168 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PEX13Q92968 403 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 ALKBH8Q96BT7 664 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 ZNF641Q96N77 438 aaPredicted RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 DHRS4Q9BTZ2 278 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 OSBPL1AQ9BXW6 950 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 CPEB1Q9BZB8 566 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 PLA2G2FQ9BZM2 168 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 IQCGQ9H095 443 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 SUV39H2Q9H5I1 410 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SLCO3A1Q9UIG8 710 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 PHTF1Q9UMS5 762 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 SMG5Q9UPR3 1016 aaKnown RBP9.74□□□□□ -0.85
RFC4-210ENST00000449502 NUMBLQ9Y6R0 609 aa9.74□□□□□ -0.85
RFC4-210ENST00000449502 TTC34A8MYJ7 566 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TRIM49D1C9J1S8 452 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TRIM24O15164 1050 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 RPP40O75818 363 aaKnown RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 FAM155BO75949 473 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 PDHA1P08559 390 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 CTPS1P17812 591 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 GCAP28676 217 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 PMLP29590 882 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 GKP32189 559 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SLC8A1P32418 973 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 GJA4P35212 333 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 LTBRP36941 435 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 HADHAP40939 763 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 EIF2DP41214 584 aaKnown RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 GRIA2P42262 883 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 GYS2P54840 703 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 CSE1LP55060 971 aaKnown RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 TEDDM1Q5T9Z0 273 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 MRNIPQ6NTE8 343 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 AFTPHQ6ULP2 937 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 GDPD4Q6W3E5 623 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 DPY19L3Q6ZPD9 716 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SUGP1Q8IWZ8 645 aaKnown RBP9.73□□□□□ -0.85
RFC4-210ENST00000449502 LMNTD2Q8IXW0 634 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 UNC5BQ8IZJ1 945 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 CYP4X1Q8N118 509 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 ANKRD42Q8N9B4 389 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TERB1Q8NA31 727 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 KDM1BQ8NB78 822 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 PPM1EQ8WY54 764 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 OR8D1Q8WZ84 308 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SUSD6Q92537 303 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 FGF14Q92915 247 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 HDAC10Q969S8 669 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.73□□□□□ -0.85
RFC4-210ENST00000449502 LRIG1Q96JA1 1093 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TSNARE1Q96NA8 513 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 CAPS2Q9BXY5 557 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 TREX1Q9NSU2 369 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 GTSE1Q9NYZ3 720 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 IL1RAPL1Q9NZN1 696 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SLC2A6Q9UGQ3 507 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 IL36AQ9UHA7 158 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 RIMKLBQ9ULI2 386 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 ZNF711Q9Y462 761 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 ARL5AQ9Y689 179 aa9.73□□□□□ -0.85
RFC4-210ENST00000449502 EDDM13A0A1B0GTR0 161 aa9.72□□□□□ -0.85
RFC4-210ENST00000449502 MROH6A6NGR9 719 aa9.72□□□□□ -0.85
RFC4-210ENST00000449502 FAM47DPA6NHR8 397 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms