RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RAB44Q7Z6P3 723 aaPredicted RBP12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 BBS5Q8N3I7 341 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 CHCHD4Q8N4Q1 142 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 PAF1Q8N7H5 531 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 TP53I13Q8NBR0 393 aaPredicted RBP12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 MAML1Q92585 1016 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 CNTNAP3BQ96NU0 1288 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 SCNM1Q9BWG6 230 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 DTLQ9NZJ0 730 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 ALG6Q9Y672 507 aa12.83□□□□□ -0.36
PRPF40A-203ENST00000448428 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 A8MX80 341 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 HTRA2O43464 458 aaPredicted RBP12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 SPOPO43791 374 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 NDUFA10O95299 355 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 TRIM16O95361 564 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 KRT1P04264 644 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 C6P13671 934 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 CCNB1P14635 433 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 IGFALSP35858 605 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 ITKQ08881 620 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 TRAF2Q12933 501 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 RALGDSQ12967 914 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 SLC9A4Q6AI14 798 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 TIGD7Q6NT04 549 aaPredicted RBP12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 VSIG1Q86XK7 387 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 PLD5Q8N7P1 536 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 FATE1Q969F0 183 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 SEMA3CQ99985 751 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 C1QTNF7Q9BXJ2 289 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 MAK16Q9BXY0 300 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 GOLPH3Q9H4A6 298 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 RBM22Q9NW64 420 aaKnown RBP eCLIP12.82□□□□□ -0.361e-9■■■■■ 40.4
PRPF40A-203ENST00000448428 UCKL1Q9NWZ5 548 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 DDX56Q9NY93 547 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 FTSJ1Q9UET6 329 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 SALL4Q9UJQ4 1053 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 PLXNB3Q9ULL4 1909 aa12.82□□□□□ -0.36
PRPF40A-203ENST00000448428 A0A0A6YYK5 440 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LZTS3O60299 673 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 SOCS5O75159 536 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 DKK1O94907 266 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LDOC1O95751 146 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 MX2P20592 715 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 DGKAP23743 735 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 YPEL5P62699 121 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 PDE1CQ14123 709 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 IHHQ14623 411 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LRRC14Q15048 493 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 AGERQ15109 404 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 IRF4Q15306 451 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 WSCD2Q2TBF2 565 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 MFSD7Q6UXD7 560 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 DPPA4Q7L190 304 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LGMNQ99538 433 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 LUC7LQ9NQ29 371 aaKnown RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 KLF15Q9UIH9 416 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 KLK13Q9UKR3 277 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 REXO2Q9Y3B8 237 aaKnown RBP12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 HEY1Q9Y5J3 304 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 DUSP10Q9Y6W6 482 aa12.81□□□□□ -0.36
PRPF40A-203ENST00000448428 A0A1W2PQ67 120 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 TRIM38O00635 465 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 ENC1O14682 589 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 APOL1O14791 398 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 PIAS2O75928 621 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 RECQL5O94762 991 aaPredicted RBP12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 PGLSO95336 258 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 CPP00450 1065 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 CSF2P04141 144 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 GM2AP17900 193 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 CDKN2BP42772 138 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 THOP1P52888 689 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 DSC2Q02487 901 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 PPIDQ08752 370 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 DNAJC3Q13217 504 aa12.8□□□□□ -0.36
PRPF40A-203ENST00000448428 INPP5AQ14642 412 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms