RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 KYQ8NBH2 561 aa17.93■□□□□ 0.46
CLDN9-201ENST00000445369 CCDC126Q96EE4 140 aa17.93■□□□□ 0.46
CLDN9-201ENST00000445369 RNF186Q9NXI6 227 aa17.93■□□□□ 0.46
CLDN9-201ENST00000445369 SLC12A8A0AV02 714 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 DPPA5A6NC42 116 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 TRPC5OSA6NMA1 111 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 LDB2O43679 373 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 IPO13O94829 963 aaKnown RBP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 LINGO3P0C6S8 592 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 CCDC166P0CW27 439 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 SATB1Q01826 763 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 GSTA3Q16772 222 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 KLC3Q6P597 504 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 KBTBD6Q86V97 674 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 B3GALT6Q96L58 329 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 GLT1D1Q96MS3 346 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 RPRD1AQ96P16 312 aaPredicted RBP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 CRISPLD1Q9H336 500 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 TMEM161AQ9NX61 479 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 STK39Q9UEW8 545 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 VPS28Q9UK41 221 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 COPG1Q9Y678 874 aaKnown RBP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 MTMR11A4FU01 709 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 CCL22O00626 93 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 VNN2O95498 520 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 S1PR4O95977 384 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 HMBSP08397 361 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 RBP1P09455 135 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 HNRNPLP14866 589 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 RING1Q06587 406 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 ACAP2Q15057 778 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 ACBD5Q5T8D3 534 aaPredicted RBP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 RNF135Q8IUD6 432 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 ANKRD49Q8WVL7 239 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 GATA6Q92908 595 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 HDAC10Q969S8 669 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 RCN3Q96D15 328 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 SPDL1Q96EA4 605 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 MYEOVQ96EZ4 313 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 MARK4Q96L34 752 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 GPR62Q9BZJ7 368 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 GTSE1Q9NYZ3 720 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 MARCH4Q9P2E8 410 aaPredicted RBP17.92■□□□□ 0.46
CLDN9-201ENST00000445369 ADAMTS6Q9UKP5 1117 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 VWA7Q9Y334 891 aa17.92■□□□□ 0.46
CLDN9-201ENST00000445369 CEP350Q5VT06 3117 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 H3BNX3 289 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 FGFR3P22607 806 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PAX7P23759 505 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ACVRL1P37023 503 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ETFBP38117 255 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PBX3P40426 434 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 MAPKAPK2P49137 400 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 YBEYP58557 167 aaPredicted RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PRAMEP78395 509 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ACVR1Q04771 509 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 NADSYN1Q6IA69 706 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 LDB1Q86U70 411 aaPredicted RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PELI3Q8N2H9 469 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 OR6P1Q8NGX9 317 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SPATA17Q96L03 361 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SERPINI1Q99574 410 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 CYP4F12Q9HCS2 524 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SLC27A5Q9Y2P5 690 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 OR51F1A6NGY5 319 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 KIF1CO43896 1103 aaKnown RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PRAMEF11O60813 436 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SKAP2O75563 359 aaPredicted RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 GJB3O75712 270 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 COL6A1P12109 1028 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 CDKN2DP55273 166 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ARPP19P56211 112 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 TMEM207Q6UWW9 146 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 BNC2Q6ZN30 1099 aaPredicted RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PGAM4Q8N0Y7 254 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 HIPK4Q8NE63 616 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 CEP70Q8NHQ1 597 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SPPL2BQ8TCT7 592 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 FAR2Q96K12 515 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 SEMA3CQ99985 751 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 POLR1EQ9GZS1 481 aaKnown RBP17.91■□□□□ 0.46
CLDN9-201ENST00000445369 PDFQ9HBH1 243 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 MARCH5Q9NX47 278 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ZDHHC7Q9NXF8 308 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 KCTD3Q9Y597 815 aa17.91■□□□□ 0.46
CLDN9-201ENST00000445369 ANKRD36A6QL64 1941 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 MOXD2PA6NHM9 499 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 MUSKO15146 869 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 ZDHHC11BP0C7U3 371 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 RAG1P15918 1043 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 OR1E1P30953 314 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 SLC26A3P40879 764 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 GALNT1Q10472 559 aaPredicted RBP17.9■□□□□ 0.46
CLDN9-201ENST00000445369 MGAT5BQ3V5L5 792 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 PIGGQ5H8A4 983 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 PDSS2Q86YH6 399 aa17.9■□□□□ 0.46
CLDN9-201ENST00000445369 SLC22A9Q8IVM8 553 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms