RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TMPRSS6Q8IU80 811 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 SPEM1Q8N4L4 309 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 PDCD6IPQ8WUM4 868 aaKnown RBP15.21■□□□□ 0.03
CCNE1-203ENST00000444983 ARRDC3Q96B67 414 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 ERLEC1Q96DZ1 483 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 SIGLEC10Q96LC7 697 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 MCCC1Q96RQ3 725 aaPredicted RBP15.21■□□□□ 0.03
CCNE1-203ENST00000444983 LYSMD1Q96S90 227 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 FOXP3Q9BZS1 431 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 PHTF1Q9UMS5 762 aa15.21■□□□□ 0.03
CCNE1-203ENST00000444983 MYLKQ15746 1914 aa15.21■□□□□ 0.02
CCNE1-203ENST00000444983 A0A0J9YYE9 177 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 C16orf96A6NNT2 1141 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 AP3B1O00203 1094 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 TRBC1P01850 177 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 TIMP2P16035 220 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 DRD3P35462 400 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 DGKEP52429 567 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 POLR2LP62875 67 aaKnown RBP15.2■□□□□ 0.02
CCNE1-203ENST00000444983 CST6Q15828 149 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 FAM46CQ5VWP2 391 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 PARS2Q7L3T8 475 aaKnown RBP15.2■□□□□ 0.02
CCNE1-203ENST00000444983 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 SCRN2Q96FV2 425 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 MRGPRX1Q96LB2 322 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 SMIM14Q96QK8 99 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 HDAC8Q9BY41 377 aa15.2■□□□□ 0.02
CCNE1-203ENST00000444983 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
CCNE1-203ENST00000444983 C1QTNF3-AMACRE9PGA6 284 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 KPNA3O00505 521 aaPredicted RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 PI15O43692 258 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 RNASEH1O60930 286 aaKnown RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 ADH1BP00325 375 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 GABRG2P18507 467 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 AOC1P19801 751 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 C5AR1P21730 350 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 ZBTB16Q05516 673 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 HLTFQ14527 1009 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 HIF1AQ16665 826 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 CDKN3Q16667 212 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 ZNF776Q68DI1 518 aaPredicted RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 RELL1Q8IUW5 271 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 PDIK1LQ8N165 341 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 AADATQ8N5Z0 425 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 DNAAF3Q8N9W5 541 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 LPCAT1Q8NF37 534 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 RMDN1Q96DB5 314 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 PPP1R16AQ96I34 528 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 FMO2Q99518 471 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 WDR83Q9BRX9 315 aaKnown RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 STK25O00506 426 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 MID1O15344 667 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 SPINT1O43278 529 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 CPP00450 1065 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 DCNP07585 359 aaKnown RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 TPH1P17752 444 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 NDUFV2P19404 249 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 PSMD8P48556 350 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 NPY2RP49146 381 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 ARL4CP56559 192 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 DHX9Q08211 1270 aaKnown RBP15.19■□□□□ 0.02
CCNE1-203ENST00000444983 MTAPQ13126 283 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 MTM1Q13496 603 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 PTPRRQ15256 657 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 CERCAMQ5T4B2 595 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 ARMC3Q5W041 872 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 FLCNQ8NFG4 579 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 SLC6A17Q9H1V8 727 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 SCML1Q9UN30 329 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 SPO11Q9Y5K1 396 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
CCNE1-203ENST00000444983 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 TMEM221A6NGB7 291 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 SDR42E2A6NKP2 422 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 M0R296 226 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 AREL1O15033 823 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 EIF3HO15372 352 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MCM3P25205 808 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 HNF1BP35680 557 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MAGEA9P43362 315 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 SUOXP51687 545 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 CLCN5P51795 746 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 CNTN1Q12860 1018 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 POM121L1PQ3SYA9 428 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 PIP5KL1Q5T9C9 394 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 ERN2Q76MJ5 926 aaKnown RBP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 GSPT2Q8IYD1 628 aaKnown RBP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MPP5Q8N3R9 675 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 BRSK1Q8TDC3 778 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 LRRC39Q96DD0 335 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 RANBP9Q96S59 729 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 TXLNGYQ9BZA5 131 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 IL22Q9GZX6 179 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms