RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 POM121BA6NF01 834 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 LMO7DNF2Z398 122 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 CACNB4O00305 520 aaPredicted RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 PRAMEF11O60813 436 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 MMP20O60882 483 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 CD160O95971 181 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 SERPINC1P01008 464 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 TPM3P06753 285 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 HOXC4P09017 264 aaPredicted RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 CES1P23141 567 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 EIF4A3P38919 411 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 PCBP4P57723 403 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 AP1S1P61966 158 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 TYRO3Q06418 890 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 KLHL30Q0D2K2 578 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 EIF3IQ13347 325 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 MTM1Q13496 603 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 PIGHQ14442 188 aaPredicted RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 AGERQ15109 404 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 CYTH1Q15438 398 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 UGP2Q16851 508 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 TBC1D25Q3MII6 688 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 CDCP2Q5VXM1 449 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 PLEKHA7Q6IQ23 1121 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 KDM7AQ6ZMT4 941 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 RBM44Q6ZP01 1051 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 EFL1Q7Z2Z2 1120 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 IRF2BP2Q7Z5L9 587 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 PHACTR4Q8IZ21 702 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 ARL14Q8N4G2 192 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 AOPEPQ8N6M6 819 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 ZNF548Q8NEK5 533 aaPredicted RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 HMCESQ96FZ2 354 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 STRADBQ9C0K7 418 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 DHX35Q9H5Z1 703 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 POLR1BQ9H9Y6 1135 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 CNOT8Q9UFF9 292 aaKnown RBP7.85□□□□□ -1.15
CD44-211ENST00000442151 CA5BQ9Y2D0 317 aa7.85□□□□□ -1.15
CD44-211ENST00000442151 NYNRINQ9P2P1 1898 aaKnown RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 PLXNB3Q9ULL4 1909 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 CEP295Q9C0D2 2601 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 WDFY3Q8IZQ1 3526 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 TEX51A0A1B0GUA7 166 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 TCRBV5S1A1TA0A578 114 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 TSPAN11A1L157 253 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 CPED1A4D0V7 1026 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 FAM72CH0Y354 149 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 TNFRSF10CO14798 259 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 CSO75390 466 aaKnown RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 DXOO77932 396 aaKnown RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 FTLP02792 175 aaPredicted RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 CYP2A6P11509 494 aaPredicted RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 SERPINB6P35237 376 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 PCK1P35558 622 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 PRKCIP41743 596 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 ABL2P42684 1182 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 ADKP55263 362 aaKnown RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 MAMLD1Q13495 774 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 HADHQ16836 314 aaKnown RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 KLHL40Q2TBA0 621 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 PRRT3Q5FWE3 981 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 FIGNQ5HY92 759 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 FAM72AQ5TYM5 149 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 FAM72DQ6L9T8 149 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 IGF2-ASQ6U949 168 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 ENPP7Q6UWV6 458 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 GPR155Q7Z3F1 870 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 FAM72BQ86X60 149 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 OR6K2Q8NGY2 324 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 SYN2Q92777 582 aaPredicted RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 TMEM159Q96B96 161 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 APOOQ9BUR5 198 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 LRRC19Q9H756 370 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 NDFIP2Q9NV92 336 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 UCKL1Q9NWZ5 548 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 AKAP7Q9P0M2 348 aaPredicted RBP7.84□□□□□ -1.15
CD44-211ENST00000442151 DNPEPQ9ULA0 475 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 PADI4Q9UM07 663 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 ATP8A1Q9Y2Q0 1164 aa7.84□□□□□ -1.15
CD44-211ENST00000442151 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 TMEM191CA6NGB0 347 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 GOLGA6L19H0YKK7 550 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 EPHB6O15197 1021 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 RAD51BO15315 384 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 PYGLP06737 847 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 CA4P22748 312 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 ZNF165P49910 485 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 PAPOLAP51003 745 aaKnown RBP7.83□□□□□ -1.16
CD44-211ENST00000442151 RPL7AP62424 266 aaKnown RBP7.83□□□□□ -1.16
CD44-211ENST00000442151 C19orf57Q0VDD7 668 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 SPIDRQ14159 915 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 FGL2Q14314 439 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 NFATC4Q14934 902 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 CLPPQ16740 277 aaPredicted RBP7.83□□□□□ -1.16
CD44-211ENST00000442151 ANO6Q4KMQ2 910 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 ATXN7L2Q5T6C5 722 aaPredicted RBP7.83□□□□□ -1.16
CD44-211ENST00000442151 RFX8Q6ZV50 586 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 SLC22A18ASQ8N1D0 253 aa7.83□□□□□ -1.16
CD44-211ENST00000442151 WDR36Q8NI36 951 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms