RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SLC36A4Q6YBV0 504 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM47EQ6ZV65 393 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 BNIPLQ7Z465 357 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 KDELC2Q7Z4H8 507 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PQLC3Q8N755 202 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 GSDMBQ8TAX9 411 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACTL9Q8TC94 416 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC35F5Q8WV83 523 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 OXNAD1Q96HP4 312 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF778Q96MU6 729 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PAFAH2Q99487 392 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TTLL2Q9BWV7 592 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 GALR2O43603 387 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PIAS1O75925 651 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SYPP08247 313 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KRT4P19013 534 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PTPN4P29074 926 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 OCRLQ01968 901 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 DLG2Q15700 870 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KHDC1Q4VXA5 237 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 OR52E8Q6IFG1 317 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ERAP2Q6P179 960 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TXNDC11Q6PKC3 985 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 LVRNQ6Q4G3 990 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZBED8Q8IZ13 594 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TAB3Q8N5C8 712 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 OR6K2Q8NGY2 324 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBXO27Q8NI29 283 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TCP10LQ8TDR4 215 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PIWIL1Q96J94 861 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 MCMBPQ9BTE3 642 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ETNK1Q9HBU6 452 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TXLNGQ9NUQ3 528 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 EVA1BQ9NVM1 165 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLHL8Q9P2G9 620 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TCRBV9S1A1TA0A576 114 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 APOC4-APOC2K7ER74 178 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 APOC2P02655 101 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 MX2P20592 715 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 L1CAMP32004 1257 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 CPOXP36551 454 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 RAP1GDS1P52306 607 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SATB1Q01826 763 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 AP1B1Q10567 949 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TFDP2Q14188 446 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 DPYSL3Q14195 570 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PRPSAP1Q14558 356 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SUZ12Q15022 739 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 NOMO1Q15155 1222 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 EML3Q32P44 896 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC25A52Q3SY17 297 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PRSS36Q5K4E3 855 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 CEP128Q6ZU80 1094 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC26A9Q7LBE3 791 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 VSIG1Q86XK7 387 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KBTBD2Q8IY47 623 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBF1Q8TES7 1133 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 FEM1CQ96JP0 617 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 HSPA12BQ96MM6 686 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM126AQ9BYI3 521 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARRDC1-AS1Q9H2J1 176 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCNK9Q9NPC2 374 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 UBA2Q9UBT2 640 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 USP3Q9Y6I4 520 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 CXorf49A8MYA2 514 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 WASH3PC4AMC7 463 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TRIM24O15164 1050 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 GSC2O15499 205 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAGEC1O60732 1142 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PRNPP04156 253 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 EZRP15311 586 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 BTKQ06187 659 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TRIM61Q5EBN2 209 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SH3PXD2AQ5TCZ1 1133 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC9A4Q6AI14 798 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 RNF111Q6ZNA4 994 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 RINLQ6ZS11 566 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 NLRP9Q7RTR0 991 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 LONP2Q86WA8 852 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 CAMKK1Q8N5S9 505 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 PLD5Q8N7P1 536 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 OR7D4Q8NG98 312 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLK6Q92876 244 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC2A11Q9BYW1 496 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF180Q9UJW8 692 aa7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 MTF2Q9Y483 593 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF487B1APH4 448 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 AGRPO00253 132 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF195O14628 629 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACADSP16219 412 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ATP6V1C1P21283 382 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 PCK1P35558 622 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARRB1P49407 418 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 EPHA5P54756 1037 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 PDIA2Q13087 525 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms