RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 MAGOHP61326 146 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 RPS24P62847 133 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPP2R2AP63151 447 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CYP4F8P98187 520 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 GAD2Q05329 585 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC20A2Q08357 652 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ITKQ08881 620 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 NSUN2Q08J23 767 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC10A7Q0GE19 358 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZBTB17Q13105 803 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 DNAJC3Q13217 504 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC12A1Q13621 1099 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CAMK1Q14012 370 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF235Q14590 738 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 FASTKD3Q14CZ7 662 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCDC85BQ15834 202 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 LONRF1Q17RB8 773 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCTD19Q17RG1 926 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 INO80DQ53TQ3 878 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TTMPQ5BVD1 217 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TNFAIP8L3Q5GJ75 292 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 RALGPS1Q5JS13 557 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PCID2Q5JVF3 399 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPANXN3Q5MJ09 141 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 HP1BP3Q5SSJ5 553 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 C9orf50Q5SZB4 431 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 GPR158Q5T848 1215 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 RNF219Q5W0B1 726 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 STEAP4Q687X5 459 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCTD16Q68DU8 428 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCTD11Q693B1 232 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 IL31Q6EBC2 164 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 RETSATQ6NUM9 610 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 RFWD3Q6PCD5 774 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARHGAP36Q6ZRI8 547 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC26A11Q86WA9 606 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 LRRC6Q86X45 466 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 IGDCC3Q8IVU1 814 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TP53INP2Q8IXH6 220 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CMTM8Q8IZV2 173 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CFAP52Q8N1V2 620 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CNTD1Q8N815 330 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 DNAAF3Q8N9W5 541 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 NETO2Q8NC67 525 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPHLN1Q8NEY8 458 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 UHMK1Q8TAS1 419 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 GSDMBQ8TAX9 411 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SHKBP1Q8TBC3 707 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 STK35Q8TDR2 534 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 USP33Q8TEY7 942 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 DDI1Q8WTU0 396 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 DEPDC1BQ8WUY9 529 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CDKL2Q92772 493 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 USP13Q92995 863 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TTC17Q96AE7 1141 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CENPTQ96BT3 561 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 OTUB2Q96DC9 234 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PABPC5Q96DU9 382 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 MTBPQ96DY7 904 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 IMP4Q96G21 291 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CFAP36Q96G28 342 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ABHD8Q96I13 439 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 FEM1CQ96JP0 617 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PSKH2Q96QS6 385 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 XPO6Q96QU8 1125 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC22A12Q96S37 553 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TBL1YQ9BQ87 522 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 FEM1AQ9BSK4 669 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPON2Q9BUD6 331 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 FSD1LQ9BXM9 530 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CAPS2Q9BXY5 557 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC46A2Q9BY10 475 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ACE2Q9BYF1 805 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CEP41Q9BYV8 373 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 MRPL18Q9H0U6 180 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SFXN1Q9H9B4 322 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 KIF9Q9HAQ2 790 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC28A3Q9HAS3 691 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 PIDD1Q9HB75 910 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATP13A1Q9HD20 1204 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TDP1Q9NUW8 608 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 SMPD4Q9NXE4 827 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 NSMCE4AQ9NXX6 385 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CFAP97Q9P2B7 532 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 UBA2Q9UBT2 640 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF180Q9UJW8 692 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CHMP2BQ9UQN3 213 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 MRPS23Q9Y3D9 190 aaKnown RBP4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 TTLL3Q9Y4R7 772 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 CPQQ9Y646 472 aa4.02□□□□□ -1.77
HMGB1P37-201ENST00000439613 ANKRD36A6QL64 1941 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 NUP210Q8TEM1 1887 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TCRBV9S1A1TA0A576 114 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCDC85CA6NKD9 419 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM159BA6NKW6 160 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 J3KR12 359 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CBX4O00257 560 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GFRA2O00451 464 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GREM1O60565 184 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TSPAN3O60637 253 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms