RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ADRA1BP35368 520 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CRATP43155 626 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 TMEM132CQ8N3T6 1108 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 C12orf76Q8N812 135 aaPredicted RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 ZC4H2Q9NQZ6 224 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 USP1O94782 785 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CMPK1P30085 196 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CSKP41240 450 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CCT8P50990 548 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 RPL7AP62424 266 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 PRKG2Q13237 762 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 PROX1Q92786 737 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 HNRNPABQ99729 332 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 PCDH12Q9NPG4 1184 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 LMO7Q8WWI1 1683 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CFHP08603 1231 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 AQP5P55064 265 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 FMO1Q01740 532 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 SLC20A2Q08357 652 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 DAB2IPQ5VWQ8 1189 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 TAC4Q86UU9 113 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 NOA1Q8NC60 698 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 FBXO25Q8TCJ0 367 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 NOP53Q9NZM5 478 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 CYP1A2P05177 515 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 VAV1P15498 845 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 AUHQ13825 339 aaKnown RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 JOSD2Q8TAC2 188 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 TDP1Q9NUW8 608 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 ADAM21Q9UKJ8 722 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 SIK3Q9Y2K2 1263 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 TM9SF1O15321 606 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 NFAT5O94916 1531 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 TBX2Q13207 712 aaPredicted RBP12.15□□□□□ -0.47
NEK1-201ENST00000439128 LPIN1Q14693 890 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 NAA30Q147X3 362 aaPredicted RBP12.15□□□□□ -0.47
NEK1-201ENST00000439128 COLEC12Q5KU26 742 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 MBLAC2Q68D91 279 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 RHBDF2Q6PJF5 856 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 STRADAQ7RTN6 431 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 KCNS3Q9BQ31 491 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 OSER1Q9NX31 292 aa12.15□□□□□ -0.47
NEK1-201ENST00000439128 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 TNFP01375 233 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 TFPIP10646 304 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ZNF23P17027 643 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SLC1A6P48664 564 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CLCN5P51795 746 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ANGPT1Q15389 498 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SLC10A6Q3KNW5 377 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CAPN13Q6MZZ7 669 aaPredicted RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 UNC5AQ6ZN44 842 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CCDC81Q6ZN84 652 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 PTGR2Q8N8N7 351 aaPredicted RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 CD101Q93033 1021 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CDH19Q9H159 772 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SFXN1Q9H9B4 322 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CHST7Q9NS84 486 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 MAT2BQ9NZL9 334 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 MRTO4Q9UKD2 239 aaKnown RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 IGFALSP35858 605 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SSR2P43308 183 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 RAD23BP54727 409 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ATXN7L2Q5T6C5 722 aaPredicted RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 LMX1AQ8TE12 382 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 HMCESQ96FZ2 354 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEK1-201ENST00000439128 SMG9Q9H0W8 520 aaKnown RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 FBXL12Q9NXK8 326 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 PHTF1Q9UMS5 762 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SLC9A8Q9Y2E8 581 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 NEMP2A6NFY4 417 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 A8MU76 341 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CHRNA1P02708 482 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SOD2P04179 222 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ITGAVP06756 1048 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 COL6A1P12109 1028 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 UBXN11Q5T124 520 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 SRLQ86TD4 932 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms