RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PARS2Q7L3T8 475 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZSWIM9Q86XI8 627 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 TMPRSS6Q8IU80 811 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZCCHC9Q8N567 271 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 PIH1D2Q8WWB5 315 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 ARRDC3Q96B67 414 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 FOXP3Q9BZS1 431 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 MKRN2Q9H000 416 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 POLR3BQ9NW08 1133 aaPredicted RBP23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 LRRK1Q38SD2 2015 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 C16orf96A6NNT2 1141 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 UPK3BL1B0FP48 263 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 UPK3BL2E5RIL1 263 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 MID1O15344 667 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 PPFIA2O75334 1257 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 DNTTP04053 509 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 AOC1P19801 751 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 XPAP23025 273 aaPredicted RBP23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 NFKBIAP25963 317 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 SLC8A1P32418 973 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 NAA30Q147X3 362 aaPredicted RBP23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 HIF1AQ16665 826 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 QPCTQ16769 361 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 DENND5AQ6IQ26 1287 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 WDR93Q6P2C0 686 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 CAND1Q86VP6 1230 aaKnown RBP23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 EIF1ADQ8N9N8 165 aaKnown RBP23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 FMO2Q99518 471 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 NFU1Q9UMS0 254 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 SCML1Q9UN30 329 aa23.35■■□□□ 1.33
SMARCAL1-208ENST00000434435 ANKRD66B4E2M5 251 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 ALDH1A2O94788 518 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 TUBBP07437 444 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 C7P10643 843 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 NEK3P51956 506 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 METAP1P53582 386 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZBTB16Q05516 673 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 TTC31Q49AM3 519 aaPredicted RBP23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 KIAA1324Q6UXG2 1013 aaKnown RBP23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 USP45Q70EL2 814 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 PDIK1LQ8N165 341 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 TSTD1Q8NFU3 115 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 SIPA1Q96FS4 1042 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 MRGPRX1Q96LB2 322 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 HDAC8Q9BY41 377 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 NEUROG2Q9H2A3 272 aa23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 PABPC3Q9H361 631 aaKnown RBP23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 PIH1D1Q9NWS0 290 aaKnown RBP23.34■■□□□ 1.33
SMARCAL1-208ENST00000434435 A0A0J9YYE9 177 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 CTIFO43310 598 aaKnown RBP23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 TRBC1P01850 177 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 GABRG2P18507 467 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 NDUFV2P19404 249 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 ECHS1P30084 290 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 MAGEA3P43357 314 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 NPY2RP49146 381 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 SESN2P58004 480 aaPredicted RBP23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 VSNL1P62760 191 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 SFSWAPQ12872 951 aaKnown RBP23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 UGP2Q16851 508 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 DNAJC21Q5F1R6 531 aaKnown RBP23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 FBXL19Q6PCT2 694 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 CEP128Q6ZU80 1094 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 ERN2Q76MJ5 926 aaKnown RBP23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 HHIPQ96QV1 700 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 SLC6A17Q9H1V8 727 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 BFARQ9NZS9 450 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 PPIL1Q9Y3C6 166 aa23.33■■□□□ 1.33
SMARCAL1-208ENST00000434435 PLXND1Q9Y4D7 1925 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 CAPN8A6NHC0 703 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 ACADMP11310 421 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 TIMP2P16035 220 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 CTPS1P17812 591 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 DRD3P35462 400 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 SUOXP51687 545 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 CLCN5P51795 746 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 CCDC15Q0P6D6 951 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 MTAPQ13126 283 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 CENPUQ71F23 418 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 TTC7BQ86TV6 843 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 AADATQ8N5Z0 425 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 HMGB4Q8WW32 186 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 PWWP2AQ96N64 755 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 SRPK1Q96SB4 655 aaKnown RBP23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 OMDQ99983 421 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 PARD6BQ9BYG5 372 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 PHACTR1Q9C0D0 580 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 TSPYL1Q9H0U9 437 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 C2orf42Q9NWW7 574 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 HACD3Q9P035 362 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 DLGAP2Q9P1A6 1054 aa23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 BCCIPQ9P287 314 aaKnown RBP eCLIP23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 ZNF106Q9H2Y7 1883 aaKnown RBP23.32■■□□□ 1.32
SMARCAL1-208ENST00000434435 A0A1W2PP55 124 aa23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 EIF3HO15372 352 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 AVILO75366 819 aa23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 CYP2A6P11509 494 aaPredicted RBP23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 ADRB3P13945 408 aa23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 TPH1P17752 444 aa23.31■■□□□ 1.32
SMARCAL1-208ENST00000434435 MGAT1P26572 445 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms