RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 CYP3A7P24462 503 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 RPA1P27694 616 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ATP5DP30049 168 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PSMC2P35998 433 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GARSP41250 739 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 DIO1P49895 249 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ALDH3A2P51648 485 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SLC16A1P53985 500 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 HADHBP55084 474 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 IRX1P78414 480 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PPP3CAQ08209 521 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TCEAL5Q5H9L2 206 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 C11orf63Q6NUN7 778 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TTC27Q6P3X3 843 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 CCDC137Q6PK04 289 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 RHOT1Q8IXI2 618 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TAGAPQ8N103 731 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ERMNQ8TAM6 284 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 DENND1AQ8TEH3 1009 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ART4Q93070 314 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FAM120BQ96EK7 910 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SIPA1Q96FS4 1042 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 IFT74Q96LB3 600 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 DMRTA2Q96SC8 542 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ZSWIM1Q9BR11 485 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ACPTQ9BZG2 426 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ROPN1BQ9BZX4 212 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ROPN1Q9HAT0 212 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 DDX4Q9NQI0 724 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FGFR1OP2Q9NVK5 253 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PCSK1NQ9UHG2 260 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 INSL6Q9Y581 213 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ALG6Q9Y672 507 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 CACNA1HO95180 2353 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ZNFX1Q9P2E3 1918 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 UMODL1Q5DID0 1318 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FOCADQ5VW36 1801 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 A0A087WZ62 844 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TMEM120BA0PK00 339 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FAM90A27PA6NNH2 459 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TAF4O00268 1085 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ARHGEF15O94989 841 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GJB5O95377 273 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TTLL1O95922 423 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SPATA31C1P0DKV0 1188 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GDI1P31150 447 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SLC16A2P36021 539 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 THPOP40225 353 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FMO5P49326 533 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SLC5A3P53794 718 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 YWHAHQ04917 246 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 KBTBD12Q3ZCT8 623 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SEL1L2Q5TEA6 688 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 USP17L6PQ6QN14 398 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ASRGL1Q7L266 308 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TSPYL5Q86VY4 417 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PALB2Q86YC2 1186 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 CLEC10AQ8IUN9 316 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ETNPPLQ8TBG4 499 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 HSPH1Q92598 858 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PRCCQ92733 491 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 SPDL1Q96EA4 605 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 MBOAT7Q96N66 472 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 FDXACB1Q9BRP7 624 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 C1orf43Q9BWL3 253 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PHF7Q9BWX1 381 aaPredicted RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 HDAC8Q9BY41 377 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GLT8D2Q9H1C3 349 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ABHD16BQ9H3Z7 469 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 RNPEPQ9H4A4 650 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 RXFP1Q9HBX9 757 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 OLFML3Q9NRN5 406 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GMPR2Q9P2T1 348 aaKnown RBP6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 GULP1Q9UBP9 304 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ARL2BPQ9Y2Y0 163 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 PCDHA1Q9Y5I3 950 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 ZMYM2Q9UBW7 1377 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 TRANK1O15050 2925 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 BRWD1Q9NSI6 2320 aa6.28□□□□□ -1.4
NIPAL3-205ENST00000432012 LACTBL1A8MY62 500 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 PHGDHO43175 533 aaKnown RBP6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 SLC25A17O43808 307 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 ZBTB14O43829 449 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 PCDH8O95206 1070 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 SNRPBP14678 240 aaKnown RBP6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 NNMTP40261 264 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 MARCKSL1P49006 195 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 MRPS9P82933 396 aaKnown RBP6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 SP140Q13342 867 aa6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
NIPAL3-205ENST00000432012 TARBP2Q15633 366 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms