RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 FSTL5Q8N475 847 aaPredicted RBP13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 KCNE4Q8WWG9 221 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 GLMNQ92990 594 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 TUBGCP5Q96RT8 1024 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 RABGEF1Q9UJ41 708 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 ATP8A1Q9Y2Q0 1164 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 OR1A2Q9Y585 309 aa13.16□□□□□ -0.3
DEPDC7-203ENST00000427755 TMEM110-MUSTN1A8MSY1 372 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 TEX33O43247 280 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 PSMA2P25787 234 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 LIG3P49916 1009 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 BLKP51451 505 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 C19orf57Q0VDD7 668 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 RALGDSQ12967 914 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 NFATC4Q14934 902 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ESRP1Q6NXG1 681 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ENPP7Q6UWV6 458 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 HID1Q8IV36 788 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 NPWQ8N729 165 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ARL10Q8N8L6 244 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 KYQ8NBH2 561 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 WDR48Q8TAF3 677 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 ECHDC3Q96DC8 303 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 NSMCE3Q96MG7 304 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 APOOQ9BUR5 198 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 CPNE5Q9HCH3 593 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 DONSONQ9NYP3 566 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 MYO6Q9UM54 1294 aa13.15□□□□□ -0.3
DEPDC7-203ENST00000427755 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 TMEM191CA6NGB0 347 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ARHGAP42A6NI28 874 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 EIF3CLB5ME19 914 aaKnown RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 KLK10O43240 276 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 RASGRP1O95267 797 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 PCCBP05166 539 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ALPIP09923 528 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 CCDC172P0C7W6 258 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 GM2AP17900 193 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ERCC2P18074 760 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 TNFAIP3P21580 790 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 RBMS1P29558 406 aaKnown RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 UCNP55089 124 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 TMPRSS3P57727 454 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 SRP54P61011 504 aaKnown RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 MTM1Q13496 603 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ELOCQ15369 112 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 TCEA2Q15560 299 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ERMARDQ5T6L9 678 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 BROXQ5VW32 411 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 E4F1Q66K89 784 aaPredicted RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 SRLQ86TD4 932 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 PLA2G15Q8NCC3 412 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 EIF3CQ99613 913 aaKnown RBP13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 PARVAQ9NVD7 372 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 SIRPGQ9P1W8 387 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 GULP1Q9UBP9 304 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
DEPDC7-203ENST00000427755 LRRC53A6NM62 1247 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 PALMO75781 387 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 RECQL5O94762 991 aaPredicted RBP13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 DESP17661 470 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 HTR1BP28222 390 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 MIPP30301 263 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 SPIDRQ14159 915 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 ARHGAP40Q5TG30 622 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 PPP1R2P3Q6NXS1 205 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 LIPIQ6XZB0 460 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 B3GNT8Q7Z7M8 397 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 TP53INP2Q8IXH6 220 aa13.13□□□□□ -0.31
DEPDC7-203ENST00000427755 AOPEPQ8N6M6 819 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms