RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ALG11Q2TAA5 492 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 WSCD2Q2TBF2 565 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 C14orf28Q4W4Y0 310 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RTL3Q8N8U3 475 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 KYQ8NBH2 561 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FAM172AQ8WUF8 416 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EXTL1Q92935 676 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RBM15Q96T37 977 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DPYSL5Q9BPU6 564 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FOXP3Q9BZS1 431 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ACTL7AQ9Y615 435 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MYLKQ15746 1914 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 A0A1W2PNU3 283 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RASA4BC9J798 803 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RASA4O43374 803 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PNMA6AP0CW24 399 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MMP8P22894 467 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RENBPP51606 427 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NDST2P52849 883 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 UBE2HP62256 183 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CDR2Q01850 454 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SERINC3Q13530 473 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 C2CD6Q53TS8 623 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LRRC73Q5JTD7 316 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TPRG1LQ5T0D9 272 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 OGFOD3Q6PK18 319 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NDUFAF2Q8N183 169 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 IL22RA1Q8N6P7 574 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GPR156Q8NFN8 814 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 USP7Q93009 1102 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EFHD1Q9BUP0 239 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GSDMCQ9BYG8 508 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ADNPQ9H2P0 1102 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 COQ6Q9Y2Z9 468 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 OR1A2Q9Y585 309 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RNF215Q9Y6U7 377 aa12.35□□□□□ -0.43
HLA-DQB3-203ENST00000425319 A0A1W2PQM1 296 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CAPN5O15484 640 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PALMO75781 387 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GFPT2O94808 682 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CPNE6O95741 557 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EEF1GP26641 437 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CSNK1DP48730 415 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 KIAA1024LP59773 190 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ZFP36L1Q07352 338 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TCEA2Q15560 299 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TGIF1Q15583 401 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 B3GNT8Q7Z7M8 397 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NOP9Q86U38 636 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EXD3Q8N9H8 876 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GPT2Q8TD30 523 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CATSPER2Q96P56 530 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TAAR9Q96RI9 348 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ASPSCR1Q9BZE9 553 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CYP4F12Q9HCS2 524 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 STARD5Q9NSY2 213 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NDFIP2Q9NV92 336 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ATP8A1Q9Y2Q0 1164 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 WASH4PA8MWX3 477 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 B4DGG1 531 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 F8VZ95 297 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM72CH0Y354 149 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TEX33O43247 280 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RECQL5O94762 991 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NTRK1P04629 796 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CYP1A1P04798 512 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms